RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Rad51dO55230 329 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Hoxa4P06798 285 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Ntrk2P15209 821 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Abcb4P21440 1276 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Vps26aP40336 327 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Atp6v0d1P51863 351 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Mcl1P97287 331 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Nhlh1Q02576 133 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Armcx5Q3UZB0 606 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm14685Q52KH6 695 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyb5d2Q5SSH8 263 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Rtl3Q6P1Y1 553 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Dlec1Q8BLA1 635 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Klhl38Q8BSF5 581 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Csnk1g2Q8BVP5 415 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Slc22a29Q8BWG6 551 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Etf1Q8BWY3 437 aaKnown RBP8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Ints10Q8K2A7 710 aaKnown RBP8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Cbr3Q8K354 277 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr434Q8VF17 321 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr1440Q8VFV4 315 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr1038Q8VGS1 319 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Bbc3Q99ML1 193 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 LpxnQ99N69 386 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Utp23Q9CX11 249 aaKnown RBP8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 CpvlQ9D3S9 478 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmbim4Q9DA39 238 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Cpne8Q9DC53 577 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Heg1E9Q7X6 1337 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Scgb2b18A0A087WPA9 112 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Zfp853A0A1D5RM95 733 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmem185aA2AF53 350 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Exoc3l2D3YUP5 789 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Cilp2D3Z7H8 1162 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr653E9PVA0 317 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Adap1E9PY16 374 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Zfp945E9PYM8 794 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Itgb1bp1O35671 200 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Prl8a2O54832 240 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 FiglaO55208 194 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Shoc2O88520 582 aaKnown RBP8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Akap3O88987 864 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Dpy19l2P0CW70 773 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyp2b10P12791 500 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Il1rl1P14719 567 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Ranbp9P69566 653 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Gabpb1Q00420 383 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Malt1Q2TBA3 832 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Pnpla5Q32LZ8 432 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Khdc4Q3TCX3 612 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Klra2Q60660 288 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 CishQ62225 257 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Rpf1Q7TND5 349 aaKnown RBP8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Olfr1275Q7TQY8 312 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Arrb1Q8BWG8 418 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 EogtQ8BYW9 527 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Clec2hQ8C1T8 218 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 CenpiQ8K1K4 746 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Mrpl47Q8K2Y7 252 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Osbpl1aQ91XL9 950 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Dph2Q9CR25 489 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Scrn1Q9CZC8 414 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Fndc8Q9D2H8 321 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 SrpraQ9DBG7 636 aaKnown RBP8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyp4v2Q9DBW0 525 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Scamp4Q9JKV5 230 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Scnn1gQ9WU39 655 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Ern2Q9Z2E3 911 aa8.8□□□□□ -1
Upf3b-201ENSMUST00000076265 Atp8b3Q6UQ17 1335 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm29797A0A140LIA7 188 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Ccdc120A2AEV7 629 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm5926E9PWJ8 236 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Apold1E9Q0X2 246 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Gm21103E9Q2Q1 267 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyp2w1E9Q816 493 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Cldn34aG3UW52 211 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Slc39a2G3X943 309 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Foxm1O08696 760 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Clk3O35492 638 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Dok2O70469 412 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 AvilO88398 819 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Orm2P07361 207 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 TubP50586 505 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Lrrc47Q505F5 581 aaKnown RBP8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Zfp78Q5U406 512 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Grm7Q68ED2 915 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Rab3ipQ68EF0 428 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 ParpbpQ6IRT3 573 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Klhl5Q6PFE1 708 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Dzip3Q7TPV2 1204 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Pyhin1Q8BV49 420 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 BpifcQ8C186 509 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 NelfbQ8C4Y3 580 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Parp10Q8CIE4 960 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Srpx2Q8R054 468 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Vmn1r19Q8R2C7 308 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Tmprss4Q8VCA5 435 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Klhdc3Q8VEM9 382 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyyr1Q8VIH7 165 aa8.79□□□□□ -1
Upf3b-201ENSMUST00000076265 Cyp2c70Q91W64 489 aa8.79□□□□□ -1
Retrieved 100 of 22,080 RNA–protein pairs in 62.5 ms