RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Slc6a16A0A1L1SR47 742 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Man1b1A2AJ15 658 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Ccdc152E9PX14 254 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Cyp2b23E9Q593 491 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 PtenO08586 403 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 E2f6O54917 272 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 GnazO70443 355 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Gdap1O88741 358 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 P01657 111 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 IghgP01863 330 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Casp2P29594 452 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Foxa2P35583 459 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Rad23aP54726 363 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Pcp4P63054 62 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Spatc1Q148B6 480 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Oas1fQ14AZ4 364 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Dmrtc1bQ2PMX6 267 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Hexim2Q3TVI4 313 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Lingo2Q3URE9 606 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Prtn3Q61096 254 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Mex3bQ69Z36 601 aaKnown RBP6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Btnl1Q7TST0 509 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 PogkQ80TC5 607 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Serpina3bQ8BYY9 420 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Gpr61Q8C010 449 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Fam78aQ8C552 283 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Pars2Q8CFI5 475 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Ulbp1Q8HWA3 334 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Tmem45bQ8VCZ2 278 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Fam110cQ8VE94 421 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Krt79Q8VED5 531 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 SelenomQ8VHC3 145 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Zfp64Q99KE8 643 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Cyp4f3Q99N16 524 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Tdrd12Q9CWU0 1215 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 TrirQ9D735 173 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Samd8Q9DA37 478 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Cyp2s1Q9DBX6 501 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Atp13a1Q9EPE9 1200 aaKnown RBP6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Slc5a3Q9JKZ2 718 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Slc25a13Q9QXX4 676 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Epb41l1Q9Z2H5 879 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Scn5aQ9JJV9 2019 aa6.69□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Ttc3O88196 1979 aaKnown RBP6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Skint9A7TZG3 319 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Gm2174F6ZVF2 133 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Trim15G3UY57 292 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Vmn2r71L7N2D8 855 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Cpsf2O35218 782 aaKnown RBP6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Tpd52l1O54818 204 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Rdh7O88451 316 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Gosr1O88630 250 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Orc4O88708 433 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 PtpaP58389 323 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Atp5iQ06185 71 aaKnown RBP6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Mmp7Q10738 264 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Gm10192Q3V0S1 108 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Zbtb8osQ505B7 168 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Ndufaf2Q59J78 168 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Traf3Q60803 567 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Defa-rs10Q64263 91 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 CelQ64285 599 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Rbl1Q64701 1063 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Mbtd1Q6P5G3 631 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Fam102aQ78T81 392 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Olfr17Q7TRM9 315 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Daam2Q80U19 1115 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 IqcgQ80W32 419 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Cyth4Q80YW0 393 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Znf689Q8BKK5 500 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 B130006D01RikQ8BRH6 153 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Lgi2Q8K4Z0 550 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Cacnb4Q8R0S4 519 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Nudcd3Q8R1N4 363 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Olfr390Q8VEZ7 311 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 GhitmQ91VC9 346 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 B3galt6Q91Z92 325 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Chmp1aQ921W0 196 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Pdzk1ip1Q9CQH0 114 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Ndc80Q9D0F1 642 aaKnown RBP6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Tmem210Q9D2F0 147 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Spata25Q9DA57 226 aa6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Acot9Q9R0X4 439 aaKnown RBP6.68□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Trbv13-1A0A0B4J1P8 112 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Lcmt1A0A0U1RNF2 332 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Zfp334A2A4U6 679 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Tex13aA2AFS9 377 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Glb1l3A2RSQ1 649 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Susd5G3UW60 619 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Dcpp3L7N259 170 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 LtfP08071 707 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 CcnoP0C242 352 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 CfpP11680 464 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Msh3P13705 1091 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Ifnar1P33896 590 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Tgfbrap1Q3UR70 860 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Usp28Q5I043 1051 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Prl2c1Q5SVL9 228 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Klra7Q60654 280 aa6.67□□□□□ -1.34
Ccdc54-201ENSMUST00000062439 Hspa4Q61316 841 aa6.67□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 28.5 ms