RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ntsr2P70310 416 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Trappc6aQ78XR0 159 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kirrel1Q80W68 789 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tram1Q91V04 374 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Acsl6Q91WC3 697 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Clec2gQ9D676 269 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Usp12Q9D9M2 370 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Spata19Q9DAQ9 154 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Eny2Q9JIX0 101 aaKnown RBP16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Naa10Q9QY36 235 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pex14Q9R0A0 376 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dnase1l3O55070 310 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 LipcP27656 510 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Spp2Q8K1I3 203 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 AcmsdQ8R519 336 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lipo4D3Z608 396 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 BcheQ03311 603 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Slc7a4Q8BLQ7 635 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 WrbQ8K0D7 174 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Krt33aQ8K0Y2 404 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mptx1Q8R1M8 219 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lysmd3Q99LE3 305 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kcnk1O08581 336 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 UncxO08934 530 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tiam2Q6ZPF3 1715 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Nlgn3Q8BYM5 825 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rbm48Q8K2X2 371 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr1311Q8VET0 312 aa16.21■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Scn4aQ9ER60 1841 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ildr2B5TVM2 661 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Snx33Q4VAA7 574 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ei24Q61070 340 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Orm3Q63805 206 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dlec1Q8BLA1 635 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cpne1Q8C166 536 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vmn1r228Q8R2A7 333 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr677Q8VF06 312 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Map4k3Q99JP0 894 aa16.21■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Wasf3Q8VHI6 501 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dusp12Q9D0T2 339 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tsc22d4Q9EQN3 387 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Akap8lQ9R0L7 642 aaKnown RBP16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dcdc2bF7BCK0 340 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Neu1O35657 409 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gpat2Q14DK4 801 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Klf8Q8BLM0 355 aaKnown RBP16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fem1cQ8CEF1 617 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Mrps2Q924T2 291 aaKnown RBP16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Nt5c1aA3KFX0 365 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 CebpaP53566 359 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 KizQ3UXL4 695 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Sp140Q6NSQ5 534 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zfp943Q6NZP4 507 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cst13Q80ZN5 141 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gpr21Q8BX79 349 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gpr61Q8C010 449 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Bend5Q8C6D4 421 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Slc22a4Q9Z306 553 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Faap100A2ACJ2 879 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Cdk5r2O35926 369 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Rhox6O70238 227 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Phf12Q5SPL2 1003 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gen1Q8BMI4 908 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Prkd2Q8BZ03 875 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Marc2Q922Q1 338 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tas1r3Q925D8 858 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Hspa14Q99M31 509 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 PolhQ9JJN0 694 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gm10479K7N6H4 105 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 ChrndP02716 520 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Msi1Q61474 362 aaKnown RBP16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 NrrosQ8BMT4 693 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acot4Q8BWN8 421 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Nup205A0A0J9YUD5 2061 aaKnown RBP16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Mettl8A2AUU0 281 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Gsg1lD3Z7H4 322 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Igfbp5Q07079 271 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Acsm3Q3UNX5 580 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Trcg1Q58Y74 825 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zc3hc1Q80YV2 501 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Olfr371Q8VGB8 312 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Get4Q9D1H7 327 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Vps29Q9QZ88 182 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dnmt3aO88508 908 aaKnown RBP16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Man2a1P27046 1150 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zdhhc11Q14AK4 347 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Pyroxd2Q3U4I7 581 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Nudt8Q9CR24 210 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 4933421I07RikQ9D420 214 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tsga13Q9DA17 273 aa16.2■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 TrhrP21761 393 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Zc3hav1lQ8BFR1 296 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Ptk7Q8BKG3 1062 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Lats1Q8BYR2 1129 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Dennd1aQ8K382 1016 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Imp3Q921Y2 184 aaKnown RBP16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Fam212aQ9CX62 282 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Tsga8Q9JJL0 238 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Myg1Q9JK81 380 aa16.19■□□□□ 0.18
Ccdc88a-201ENSMUST00000040182 Skint1A7TZE6 364 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 31.5 ms