RNA–Protein interactions for RNA: ENSMUST00000031377.8

Scarb2-201, Transcript of Lysosome membrane protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scarb2, Length 4,698 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2-201ENSMUST00000031377 Slco1a4Q9EP96 670 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Akap8lQ9R0L7 642 aaKnown RBP13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Creb3l1Q9Z125 519 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Scgb2b17S4R2V3 82 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Zfp472B0V2W5 534 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Gm8334F7CD45 553 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Olfr319L7MTY4 306 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 F2P19221 618 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Lhx3P50481 400 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Eif2ak2Q03963 515 aaKnown RBP13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Rnf43Q5NCP0 784 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Orm1Q60590 207 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Cntn4Q69Z26 1026 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Vwa2Q70UZ7 791 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Cdkn3Q810P3 211 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Vmn1r188Q8K3N2 308 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Tex19.2Q9D5S1 317 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Fzd9Q9R216 592 aa13.15□□□□□ -0.3
Scarb2-201ENSMUST00000031377 Aldoart2A6ZI47 364 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ackr2O08707 378 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Itm2bO89051 266 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gpx3P46412 226 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Arhgap39P59281 1107 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 H2-Q2Q4KN81 360 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 GkQ64516 559 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Colgalt2Q6NVG7 625 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Trim45Q6PFY8 580 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Aldh3b1Q80VQ0 468 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Nrde2Q80XC6 1172 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ncs1Q8BNY6 190 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Cdkal1Q91WE6 578 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 GneQ91WG8 722 aaKnown RBP13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Trhr2Q9ERT2 382 aa13.15□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Trip11E9Q512 1976 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Fer1l6E0CZ42 1862 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr592E9PYB3 312 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 4930579F01RikE9Q3L6 325 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Cyp27b1O35084 507 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gosr2O35166 212 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Lgals7O54974 136 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 AmbnO55189 407 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gdpgp1Q3TLS3 386 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Rars2Q3U186 578 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Slc9a8Q8R4D1 576 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tmem159Q922Z1 161 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Hspa14Q99M31 509 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Map2k5Q9WVS7 448 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gm43951A0A0N4SUT6 962 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Cylc1A0A1B0GR13 642 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 A0A1Y7VIU7 259 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gm7945F6QI24 236 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gm4847G3X946 537 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mapk12O08911 367 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Serpine1P22777 402 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 HmgclP38060 325 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 TshrP47750 764 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Alox5P48999 674 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Slc26a1P58735 704 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Rplp2P99027 115 aaKnown RBP13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 SynaQ5G5D5 617 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mocs1Q5RKZ7 636 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Sim1Q61045 765 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr814Q7TRH4 310 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Scamp1Q8K021 338 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Vmn1r206Q8R277 312 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 NrmQ8VC65 262 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 GlyatQ91XE0 296 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Prkar1aQ9DBC7 381 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Nipa2Q9JJC8 359 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tpk1Q9R0M5 243 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gm19965J3QNY8 723 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 CaskO70589 926 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Csnk2bP67871 215 aaKnown RBP13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tmem207P86045 143 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Naf1Q3UMQ8 489 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tmc6Q7TN60 810 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ldoc1Q7TPY9 151 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Npas4Q8BGD7 802 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Gper1Q8BMP4 375 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Fam46bQ8C152 427 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Slc45a3Q8K0H7 553 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Klhl25Q8R2P1 589 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tmcc3Q8R310 477 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr382Q8VF79 312 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 DdoQ922Z0 341 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Atoh8Q99NA2 322 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Zswim1Q9CWV7 455 aaKnown RBP13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 MsraQ9D6Y7 233 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Epb41l4bQ9JMC8 527 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Dio2Q9Z1Y9 266 aa13.14□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Ces2hF6Z9B9 558 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 RfngO09009 332 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Tuba3aP05214 450 aaKnown RBP13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 P2rx3Q3UR32 397 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Q3UST5 385 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Olfr381Q5SSP0 311 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Serpina3aQ6P4P1 422 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Mapre3Q6PER3 281 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Phf21aQ6ZPK0 659 aa13.13□□□□□ -0.31
Scarb2-201ENSMUST00000031377 Dsg4Q7TMD7 1041 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms