RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 AXIN1O15169 862 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 TNFP01375 233 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 CCND1P24385 295 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 PEBP1P30086 187 aaKnown RBP16.96■□□□□ 0.31
PHGDH-232ENST00000641947 PTGR1Q14914 329 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 DNAL1Q4LDG9 190 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 REP15Q6BDI9 236 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 TSSK4Q6SA08 328 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 CYP20A1Q6UW02 462 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 RETREG3Q86VR2 466 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 CADM4Q8NFZ8 388 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 PROKR1Q8TCW9 393 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 PATE1Q8WXA2 126 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 KLHDC7BQ96G42 594 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 RAB3IPQ96QF0 476 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-232ENST00000641947 EHD1Q9H4M9 534 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 MRGBPQ9NV56 204 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 SPATA6Q9NWH7 488 aaPredicted RBP16.96■□□□□ 0.31
PHGDH-232ENST00000641947 C1orf109Q9NX04 203 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 DLGAP4Q9Y2H0 992 aa16.96■□□□□ 0.31
PHGDH-232ENST00000641947 A0A088AWK7 358 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 ASPDHA6ND91 283 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 NPIPB8E9PQR5 432 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 SEC22BO75396 215 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 SORBS2O94875 1100 aaKnown RBP16.95■□□□□ 0.3
PHGDH-232ENST00000641947 PGM1P36871 562 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 HSD17B2P37059 387 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 SLC19A1P41440 591 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 DPP6P42658 865 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 FAM129CQ86XR2 697 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 DEFB107AQ8IZN7 70 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 DSELQ8IZU8 1212 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 EFCAB3Q8N7B9 438 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 OR2L8Q8NGY9 312 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 HUS1BQ8NHY5 278 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 C1orf216Q8TAB5 229 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 SMPDL3AQ92484 453 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 HSPA12BQ96MM6 686 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 THTPAQ9BU02 230 aa16.95■□□□□ 0.3
PHGDH-232ENST00000641947 NOP53Q9NZM5 478 aaKnown RBP16.95■□□□□ 0.3
PHGDH-232ENST00000641947 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 MAGEB17A8MXT2 336 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 MAP3K13O43283 966 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 PCNAP12004 261 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 F3P13726 295 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 CSTF3Q12996 717 aaKnown RBP16.94■□□□□ 0.3
PHGDH-232ENST00000641947 KRT33BQ14525 404 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 RPS6KA2Q15349 733 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 SMU1Q2TAY7 513 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 VPS26BQ4G0F5 336 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 USP39Q53GS9 565 aaKnown RBP16.94■□□□□ 0.3
PHGDH-232ENST00000641947 CYB5D1Q6P9G0 228 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 BLOC1S3Q6QNY0 202 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 RIPOR1Q6ZS17 1223 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 FAM20CQ8IXL6 584 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 LAS2Q8IYD9 372 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 TMEFF1Q8IYR6 380 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 KYQ8NBH2 561 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 MCUR1Q96AQ8 359 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 HAUS8Q9BT25 410 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 EFCAB11Q9BUY7 163 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 SLC25A23Q9BV35 468 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 PCED1AQ9H1Q7 454 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 KIR3DX1Q9H7L2 352 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 ASIC5Q9NY37 505 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 ZIM2Q9NZV7 527 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 PCDHGA11Q9Y5H2 935 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 WDFY4Q6ZS81 3184 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 GOLGA4Q13439 2230 aaKnown RBP16.94■□□□□ 0.3
PHGDH-232ENST00000641947 IGKV1-8A0A0C4DH67 115 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 PRICKLE3O43900 615 aaPredicted RBP16.94■□□□□ 0.3
PHGDH-232ENST00000641947 NRP2O60462 931 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 SH3BGRLO75368 114 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 SLC22A3O75751 556 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 BCKDHAP12694 445 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 ILF3Q12906 894 aaKnown RBP eCLIP16.94■□□□□ 0.3
PHGDH-232ENST00000641947 GRIK2Q13002 908 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 C1orf61Q13536 156 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 RCAN2Q14206 197 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 MAPRE2Q15555 327 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 SF1Q15637 639 aaKnown RBP16.94■□□□□ 0.3
PHGDH-232ENST00000641947 MED27Q6P2C8 311 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 VN1R5Q7Z5H4 357 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 PARGQ86W56 976 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 ULK2Q8IYT8 1036 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 PHACTR4Q8IZ21 702 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 LIX1Q8N485 282 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 CMTM7Q96FZ5 175 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 SPHK1Q9NYA1 384 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 TAAR2Q9P1P5 351 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 BAIAP2L1Q9UHR4 511 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 HEBP2Q9Y5Z4 205 aa16.94■□□□□ 0.3
PHGDH-232ENST00000641947 NCOR1O75376 2440 aa16.93■□□□□ 0.3
PHGDH-232ENST00000641947 AMD1P17707 334 aa16.93■□□□□ 0.3
PHGDH-232ENST00000641947 TACR1P25103 407 aa16.93■□□□□ 0.3
PHGDH-232ENST00000641947 CD38P28907 300 aa16.93■□□□□ 0.3
PHGDH-232ENST00000641947 RPS13P62277 151 aaKnown RBP16.93■□□□□ 0.3
PHGDH-232ENST00000641947 IRX1P78414 480 aaPredicted RBP16.93■□□□□ 0.3
PHGDH-232ENST00000641947 C17orf64Q86WR6 236 aa16.93■□□□□ 0.3
PHGDH-232ENST00000641947 MFSD2AQ8NA29 543 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms