RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 KLK4Q9Y5K2 254 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 SPTBN4Q9H254 2564 aa12.68□□□□□ -0.38
GTF3A-209ENST00000640289 A0A0J9YVX5 310 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 A8MT66 165 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 TMEM150CB9EJG8 249 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 C9orf172C9J069 976 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 HAT1O14929 419 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 POLR1CO15160 346 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 SPAG7O75391 227 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 IPO13O94829 963 aaKnown RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 SIX3O95343 332 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 RBMS1P29558 406 aaKnown RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 CRHR1P34998 444 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 CCT5P48643 541 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 ALDH18A1P54886 795 aaKnown RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 MEF2AQ02078 507 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 ACY1Q03154 408 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 CYP4F3Q08477 520 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 CATSPEREQ5SY80 951 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 ZNF425Q6IV72 752 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 LCA5Q86VQ0 697 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 PTGR2Q8N8N7 351 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 BANPQ8N9N5 519 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 OR1L3Q8NH93 324 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 MDM1Q8TC05 714 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 UBTD2Q8WUN7 234 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 SLC5A11Q8WWX8 675 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 NEIL2Q969S2 332 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 APOPT1Q96IL0 206 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 TAAR9Q96RI9 348 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 HAUS8Q9BT25 410 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 SPNS1Q9H2V7 528 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 CNOT10Q9H9A5 744 aaKnown RBP12.67□□□□□ -0.38
GTF3A-209ENST00000640289 ASCL3Q9NQ33 180 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 FBXO8Q9NRD0 319 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 DNAJC11Q9NVH1 559 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 ANKMY1Q9P2S6 941 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 RARRES3Q9UL19 164 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 DYRK1BQ9Y463 629 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 B3GALT1Q9Y5Z6 326 aa12.67□□□□□ -0.38
GTF3A-209ENST00000640289 CDRT15L2A8MXV6 281 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 C1QTNF9BB2RNN3 333 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 E7EQ34 232 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 AGPSO00116 658 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 MAP3K7O43318 606 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 DLX3O60479 287 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 PLIN3O60664 434 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 SMIM24O75264 130 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 TIAF1O95411 115 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 PROCP04070 461 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 C1QTNF9P0C862 333 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 FGF5P12034 268 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 VARSP26640 1264 aaKnown RBP12.66□□□□□ -0.38
GTF3A-209ENST00000640289 SLC5A2P31639 672 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 CSNK1G2P78368 415 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 CDC16Q13042 620 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 TNFAIP8L3Q5GJ75 292 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 DCAF12Q5T6F0 453 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 PRAMEF17Q5VTA0 474 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 FRMPD2BQ6IN97 320 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 FBXO42Q6P3S6 717 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 RNF44Q7L0R7 432 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 TMPRSS11BQ86T26 416 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 EXOC3L1Q86VI1 746 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 PPP1R3BQ86XI6 285 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 SNX31Q8N9S9 440 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 SMC6Q96SB8 1091 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 RUFY1Q96T51 708 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 CHRNA10Q9GZZ6 450 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 ACSS2Q9NR19 701 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 TMEM184CQ9NVA4 438 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 MKS1Q9NXB0 559 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 OPTCQ9UBM4 332 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 PILRAQ9UKJ1 303 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 GRID1Q9ULK0 1009 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 SNX7Q9UNH6 387 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 ADAMTS20P59510 1910 aa12.66□□□□□ -0.38
GTF3A-209ENST00000640289 LOC105369274A0A096LPK9 316 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 LOC102723532A0A0G2JNH3 316 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 FEZF1A0PJY2 475 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 G3V2L1 256 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 K7EPI3 171 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PRAMEF4O60810 478 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 DXOO77932 396 aaKnown RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 MSL3P1P0C860 447 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 EPORP19235 508 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 TAC1P20366 129 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 EEF1DP29692 281 aaKnown RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 RAB15P59190 212 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 NAA25Q14CX7 972 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PCBP2Q15366 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PDK4Q16654 411 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 ZC3H12BQ5HYM0 836 aaKnown RBP12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PRAMEF9Q5VWM5 478 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 PWWP2BQ6NUJ5 590 aa12.65□□□□□ -0.38
GTF3A-209ENST00000640289 IGF2-ASQ6U949 168 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms