RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-223ENST00000637033 USE1Q9NZ43 259 aa12.66□□□□□ -0.38
CHRNA7-223ENST00000637033 SH3BP4Q9P0V3 963 aa12.66□□□□□ -0.38
CHRNA7-223ENST00000637033 KIAA1522Q9P206 1035 aaPredicted RBP12.66□□□□□ -0.38
CHRNA7-223ENST00000637033 DNMT3LQ9UJW3 386 aa12.66□□□□□ -0.38
CHRNA7-223ENST00000637033 MYO7AQ13402 2215 aa12.66□□□□□ -0.38
CHRNA7-223ENST00000637033 FAM227AF5H4B4 570 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 MFN2O95140 757 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 CCDC159P0C7I6 412 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 NFATC2Q13469 925 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 TIGD6Q17RP2 521 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 SERPINA13PQ6UXR4 307 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 LYSMD2Q8IV50 215 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 SLC44A2Q8IWA5 706 aaPredicted RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 ENTHD1Q8IYW4 607 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 SH3GL1Q99961 368 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 APOL4Q9BPW4 351 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 DDX28Q9NUL7 540 aaKnown RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 B3GNT3Q9Y2A9 372 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 DNMT3AQ9Y6K1 912 aaPredicted RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 SLC38A8A6NNN8 435 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 CTDSP2O14595 271 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 LAMP1P11279 417 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 OR1D2P34982 312 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 HNF1BP35680 557 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 CSKP41240 450 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 GABARAPL2P60520 117 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 NPRL3Q12980 569 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 CAMK2GQ13555 558 aaPredicted RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 MED22Q15528 200 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 IER5LQ5T953 404 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 SHQ1Q6PI26 577 aaKnown RBP12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 OR5AK3PQ8NH89 298 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 ATL1Q8WXF7 558 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 STARD8Q92502 1023 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 MED8Q96G25 268 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 CCDC115Q96NT0 180 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 FEVQ99581 238 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 COPS8Q99627 209 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 BEX2Q9BXY8 128 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 CLEC4EQ9ULY5 219 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 VPS9D1Q9Y2B5 631 aa12.65□□□□□ -0.38
CHRNA7-223ENST00000637033 SLC28A1O00337 649 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 SLC16A6O15403 523 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 PRAMEF4O60810 478 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 BPIP17213 487 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 EPORP19235 508 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 DGKAP23743 735 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 CCND3P30281 292 aaPredicted RBP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 CA8P35219 290 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 KIR3DL1P43629 444 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 CDH4P55283 916 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 PRAMEF9Q5VWM5 478 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 RSBN1Q5VWQ0 802 aaPredicted RBP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 NEK5Q6P3R8 708 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 UBE2R2Q712K3 238 aaPredicted RBP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 NANOGNBQ7Z5D8 188 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 AKAP14Q86UN6 197 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 OR4K1Q8NGD4 311 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 RHOXF1Q8NHV9 184 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 APH1BQ8WW43 257 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 S100ZQ8WXG8 99 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 TRIB2Q92519 343 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 ASIC4Q96FT7 647 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 DUSP21Q9H596 190 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 ACSL6Q9UKU0 697 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 KRT6AP02538 564 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 KRT6BP04259 564 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 KDELR2P33947 212 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 RYKP34925 604 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 KRT6CP48668 564 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 SMARCB1Q12824 385 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 MBTPS1Q14703 1052 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 TAB1Q15750 504 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 ZNF404Q494X3 552 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 SPATS1Q496A3 300 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 SNX20Q7Z614 316 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 OR8H2Q8N162 312 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 SETD9Q8NE22 299 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 OR9Q2Q8NGE9 314 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 LINC01599Q8WXQ3 324 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 PEX13Q92968 403 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 NDEL1Q9GZM8 345 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 IL1RAPQ9NPH3 570 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 RNF6Q9Y252 685 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 H3BM21 787 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 GFRA2O00451 464 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 DUSP11O75319 330 aaKnown RBP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 STC2O76061 302 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 TGFBR2P37173 567 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 FEN1P39748 380 aaKnown RBP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 CRATP43155 626 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 STK19P49842 368 aaPredicted RBP12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 CDH12P55289 794 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 CDH18Q13634 790 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 DSC3Q14574 896 aa12.64□□□□□ -0.39
CHRNA7-223ENST00000637033 HKDC1Q2TB90 917 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms