RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 APLP1P51693 650 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 CD300LFQ8TDQ1 290 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 UFD1Q92890 307 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 LATO43561 262 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 ATF4P18848 351 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 GGT5P36269 586 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 HMGCS1Q01581 520 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 MTFR2Q6P444 385 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 KCNJ9Q92806 393 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 COL21A1Q96P44 957 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 MICAL3Q7RTP6 2002 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 A0A1B0GVM2 712 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 TCAF2A6NFQ2 919 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 GABRB2P47870 512 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 SNTA1Q13424 505 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 TEX44Q53QW1 395 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 ZNF311Q5JNZ3 666 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 ARL9Q6T311 187 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 RPS27LQ71UM5 84 aaKnown RBP17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 ADGRD2Q7Z7M1 963 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 KLRG1Q96E93 195 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 TMEM41AQ96HV5 264 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 KAZALD1Q96I82 304 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 TELO2Q9Y4R8 837 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 NEMP2A6NFY4 417 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 NIPSNAP2O75323 286 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 GP1BBP13224 206 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 MAGEA3P43357 314 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 MAD2L1BPQ15013 274 aaPredicted RBP17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 TMEM35AQ53FP2 167 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 LIX1LQ8IVB5 337 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 TOR1AIP2Q8NFQ8 470 aa17.41■□□□□ 0.38
CACNA1A-227ENST00000636549 PITPNM1O00562 1244 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 ARHGAP22Q7Z5H3 698 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 RSL24D1Q9UHA3 163 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 A0A1W2PRQ8 180 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 OPN1LWP04000 364 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 HK1P19367 917 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 CHRNA6Q15825 494 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 IL17AQ16552 155 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 CA9Q16790 459 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 CREG2Q8IUH2 290 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 BADQ92934 168 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 TRNAU1APQ9NX07 287 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 A0A1W2PRB8 838 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 PON2Q15165 354 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 ATXN2LQ8WWM7 1075 aaKnown RBP17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 SH3PXD2BA1X283 911 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 GPR25O00155 361 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 ELF3P78545 371 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 SLC9B2Q86UD5 537 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 AADATQ8N5Z0 425 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 SLC22A14Q9Y267 594 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 UBIAD1Q9Y5Z9 338 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 OR6C74A6NCV1 312 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 H3BUI4 141 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 HCRTO43612 131 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 LDOC1O95751 146 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 TYRP14679 529 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 HNF1BP35680 557 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 GBX2P52951 348 aaPredicted RBP17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 XIAPP98170 497 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 CYTH4Q9UIA0 394 aa17.4■□□□□ 0.38
CACNA1A-227ENST00000636549 TMEM214Q6NUQ4 689 aaKnown RBP17.39■□□□□ 0.38
CACNA1A-227ENST00000636549 HAS1Q92839 578 aa17.39■□□□□ 0.38
CACNA1A-227ENST00000636549 CMKLR1Q99788 373 aa17.39■□□□□ 0.38
CACNA1A-227ENST00000636549 ARL8BQ9NVJ2 186 aa17.39■□□□□ 0.38
CACNA1A-227ENST00000636549 FXYD6-FXYD2A0A087WZ82 144 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 HDAC3O15379 428 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 MMP14P50281 582 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 OLIG2Q13516 323 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 TPRG1Q6ZUI0 275 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PIM3Q86V86 326 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PCDH19Q8TAB3 1148 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 AGAP11Q8TF27 550 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 TRIB2Q92519 343 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 MAP3K3Q99759 626 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 FXYD6Q9H0Q3 95 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 FARSBQ9NSD9 589 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 MAN2C1Q9NTJ4 1040 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 CDC14AQ9UNH5 594 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 C14orf166Q9Y224 244 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 A0A0U1RQK1 487 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 C5orf60A6NFR6 353 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 CCNKO75909 580 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 CNTD1Q8N815 330 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PLD4Q96BZ4 506 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 SLC25A44Q96H78 314 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 TTYH1Q9H313 450 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 CXXC1Q9P0U4 656 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 IFT80Q9P2H3 777 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 FEZF1A0PJY2 475 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 UPK3BL1B0FP48 263 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 UPK3BL2E5RIL1 263 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PRKD3O94806 890 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 NIPAL4Q0D2K0 466 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PRKD1Q15139 912 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 RAB30Q15771 203 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 NTRK3Q16288 839 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms