RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 RGS4P49798 205 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 EMP3P54852 163 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 SOX8P57073 446 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 ARF3P61204 181 aaPredicted RBP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 RELAQ04206 551 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 OCA2Q04671 838 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 SRSF1Q07955 248 aaKnown RBP eCLIP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 RAPSNQ13702 412 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 MYBPC3Q14896 1274 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 MORF4L2Q15014 288 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 MUM1Q2TAK8 710 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 THEMIS2Q5TEJ8 643 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 VWA5B1Q5TIE3 1220 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 KIAA0408Q6ZU52 694 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 COX15Q7KZN9 410 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 PIWIL4Q7Z3Z4 852 aaKnown RBP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 PAQR7Q86WK9 346 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 SPNS2Q8IVW8 549 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 CNTN4Q8IWV2 1026 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 PALM2Q8IXS6 379 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 LRRC56Q8IYG6 542 aaPredicted RBP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 METTL27Q8N6F8 245 aaPredicted RBP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 EFCAB3Q8N7B9 438 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 PPFIBP2Q8ND30 876 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 MCOLN3Q8TDD5 553 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 VPS50Q96JG6 964 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 CABS1Q96KC9 395 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 CCDC138Q96M89 665 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 NDNQ99608 321 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 SPSB2Q99619 263 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 NAPGQ99747 312 aaPredicted RBP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 PPANQ9NQ55 473 aaKnown RBP10.35□□□□□ -0.75
SSBP4-215ENST00000625926 ABCF3Q9NUQ8 709 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 TAS2R13Q9NYV9 303 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 CDC14AQ9UNH5 594 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 MAU2Q9Y6X3 613 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 ABCA12Q86UK0 2595 aa10.35□□□□□ -0.75
SSBP4-215ENST00000625926 IGKV1-8A0A0C4DH67 115 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 VSTM2BA6NLU5 285 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 CCDC188H7C350 402 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 TXNDC9O14530 226 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 SLC16A5O15375 505 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 VPS4BO75351 444 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 IPO13O94829 963 aaKnown RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 SORBS2O94875 1100 aaKnown RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 AHSGP02765 367 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 C8GP07360 202 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 EZRP15311 586 aaKnown RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 HRH2P25021 359 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 GABRB3P28472 473 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 ELK3P41970 407 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 AIMP2Q13155 320 aaKnown RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 PRTGQ2VWP7 1150 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 ZNF425Q6IV72 752 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 HIBCHQ6NVY1 386 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 JMJD6Q6NYC1 403 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 PAQR3Q6TCH7 311 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 ADCK2Q7Z695 626 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 GALNT7Q86SF2 657 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 IGDCC3Q8IVU1 814 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 TMEM151BQ8IW70 566 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 MYO1HQ8N1T3 1032 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 DTWD1Q8N5C7 304 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 CSNK1A1LQ8N752 337 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 CPT1CQ8TCG5 803 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 EEF1AKMT1Q8WVE0 214 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 RERGQ96A58 199 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 LRRC39Q96DD0 335 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 CERS2Q96G23 380 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 PDLIM2Q96JY6 352 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 OR2A5Q96R48 311 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 MFRPQ9BY79 579 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 PCBD2Q9H0N5 130 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 SOX17Q9H6I2 414 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 ZNF552Q9H707 407 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 PARVBQ9HBI1 364 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 SLAMF7Q9NQ25 335 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 SEMA3GQ9NS98 782 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 STOX2Q9P2F5 926 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 RNF14Q9UBS8 474 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 CTSFQ9UBX1 484 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 ZNF282Q9UDV7 671 aaPredicted RBP10.34□□□□□ -0.75
SSBP4-215ENST00000625926 VPS4AQ9UN37 437 aa10.34□□□□□ -0.75
SSBP4-215ENST00000625926 COL6A6A6NMZ7 2263 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 H7BY64 318 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 MASP2O00187 686 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 SOCS6O14544 535 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 PRPF4O43172 522 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■■□ 22.6
SSBP4-215ENST00000625926 MED26O95402 600 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 HIST1H2AGP0C0S8 130 aaPredicted RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 HIST1H2ADP20671 130 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 VARSP26640 1264 aaKnown RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 IMPA1P29218 277 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 ITGA8P53708 1063 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 CDKN2DP55273 166 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 ARL4CP56559 192 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 TIAL1Q01085 375 aaKnown RBP eCLIP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 SP140Q13342 867 aa10.33□□□□□ -0.76
SSBP4-215ENST00000625926 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
SSBP4-215ENST00000625926 RBBP7Q16576 425 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms