RNA–Protein interactions for RNA: ENST00000623706.3

ATRX-212, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 2

Gene ATRX, Length 7,245 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-212ENST00000623706 ZNF517Q6ZMY9 492 aaPredicted RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 PTCHD4Q6ZW05 846 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 CDC20BQ86Y33 519 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 NKX2-3Q8TAU0 364 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 PIWIL2Q8TC59 973 aaKnown RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 KCNE4Q8WWG9 221 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 NCSTNQ92542 709 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 FAHD2AQ96GK7 314 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 PIWIL1Q96J94 861 aaKnown RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 DHRS4Q9BTZ2 278 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 WRAP53Q9BUR4 548 aaKnown RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 FRMD8P1Q9BZ68 369 aaPredicted RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 FZD8Q9H461 694 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 ARNT2Q9HBZ2 717 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 UBQLN4Q9NRR5 601 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 EMILIN3Q9NT22 766 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 LMBRD1Q9NUN5 540 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 PYCARDQ9ULZ3 195 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 USP22Q9UPT9 525 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 EXO1Q9UQ84 846 aaKnown RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 HCN4Q9Y3Q4 1203 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 F8VP50 259 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 MRASO14807 208 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 EIF4E2O60573 245 aaKnown RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 TFP02787 698 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 PTPREP23469 700 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SERPINB5P36952 375 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 CAPGP40121 348 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 MMP13P45452 471 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 NRIP1P48552 1158 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 RAB27AP51159 221 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 HADHBP55084 474 aaKnown RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 CCINQ13939 588 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SLC10A1Q14973 349 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 RASA2Q15283 850 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 GPR68Q15743 365 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 DNM1P34Q6PK57 102 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 ZNF782Q6ZMW2 699 aaPredicted RBP3.4□□□□□ -1.86
ATRX-212ENST00000623706 OTOP1Q7RTM1 612 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 ANKRD46Q86W74 232 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SYT12Q8IV01 421 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 FAM109AQ8N4B1 249 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 NECAP1Q8NC96 275 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 OR4K15Q8NH41 348 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SPPL2AQ8TCT8 520 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 TMEM143Q96AN5 459 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SDSLQ96GA7 329 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 FAR2Q96K12 515 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 CNTNAP3BQ96NU0 1288 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 HIST1H2AAQ96QV6 131 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SULT4A1Q9BR01 284 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 NRSN2Q9GZP1 204 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 DPEP3Q9H4B8 488 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 SLC22A14Q9Y267 594 aa3.4□□□□□ -1.86
ATRX-212ENST00000623706 PMS2P1A4D2B8 440 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 KBTBD13C9JR72 458 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 CES2O00748 559 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 FBP2O00757 339 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 RGS13O14921 159 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 AGPAT2O15120 278 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 PDPK1O15530 556 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 DCXO43602 365 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 CCNT1O60563 726 aaKnown RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 HPGDSO60760 199 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 PRAMEF4O60810 478 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 SNAPINO95295 136 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 URODP06132 367 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 KLK1P06870 262 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 MRPL3P09001 348 aaKnown RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 OSMP13725 252 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 PRPS1L1P21108 318 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 ACO1P21399 889 aaKnown RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 ADH6P28332 368 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 CCND2P30279 289 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 CHRNA4P43681 627 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 MAP2K4P45985 399 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 CAMLGP49069 296 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 GNG2P59768 71 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 MRPS6P82932 125 aaKnown RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 FKBP3Q00688 224 aaKnown RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 SP3Q02447 781 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 SQSTM1Q13501 440 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 SLC39A4Q6P5W5 647 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 DCLRE1AQ6PJP8 1040 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 FOXR2Q6PJQ5 311 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 VSTM1Q6UX27 236 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 ABHD12BQ7Z5M8 362 aaPredicted RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 ZER1Q7Z7L7 766 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 TMEM135Q86UB9 458 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 OR2M7Q8NG81 312 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 ZNF564Q8TBZ8 553 aaPredicted RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 TSEN15Q8WW01 171 aaKnown RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 PYDC1Q8WXC3 89 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 C10orf90Q96M02 699 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 OR2M2Q96R28 347 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 REEP2Q9BRK0 252 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 OR2B2Q9GZK3 357 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 BEX4Q9NWD9 120 aaPredicted RBP3.4□□□□□ -1.87
ATRX-212ENST00000623706 SNTG2Q9NY99 539 aa3.4□□□□□ -1.87
ATRX-212ENST00000623706 TAS2R14Q9NYV8 317 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms