RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 HMBSP08397 361 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 SSTR2P30874 369 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 DNAJA1P31689 397 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 RFX2P48378 723 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 RPL6Q02878 288 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 MFSD10Q14728 455 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC51BQ86UW2 128 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 CNTN4Q8IWV2 1026 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 VWA5B2Q8N398 1253 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 SIDT2Q8NBJ9 832 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 ST8SIA2Q92186 375 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 GGHQ92820 318 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 MAGEB10Q96LZ2 347 aaPredicted RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 PARK7Q99497 189 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 DUSP16Q9BY84 665 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 CDCP1Q9H5V8 836 aa9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 DCAF13Q9NV06 445 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 PRRC2BQ5JSZ5 2229 aaKnown RBP9.51□□□□□ -0.89
TNFAIP3-210ENST00000620204 PIPSLA2A3N6 862 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 GFRA2O00451 464 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RFXANKO14593 260 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 NIPSNAP2O75323 286 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 C9P02748 559 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 HSPA7P48741 367 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ERVPABLB-1P60509 514 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RPA4Q13156 261 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 DDX39BQ13838 428 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ABRAXAS2Q15018 415 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RNASE12Q5GAN4 147 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TYW3Q6IPR3 259 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TIGD7Q6NT04 549 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 LETMD1Q6P1Q0 360 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 MSANTD2Q6P1R3 559 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ASB18Q6ZVZ8 466 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ENTHD1Q8IYW4 607 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TMEM132CQ8N3T6 1108 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TSPEARQ8WU66 669 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RHBDF1Q96CC6 855 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 WACQ9BTA9 647 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 CCDC32Q9BV29 185 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TTLL2Q9BWV7 592 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 NXF3Q9H4D5 531 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 IPPKQ9H8X2 491 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 GABRQQ9UN88 632 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RECQL4O94761 1208 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 PSMA1P25786 263 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RPS19P39019 145 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RORCP51449 518 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SMSP52788 366 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 OLR1P78380 273 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SLC10A7Q0GE19 358 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 FADDQ13158 208 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 MAB21L1Q13394 359 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 IL18Q14116 193 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 DSC3Q14574 896 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 GARNL3Q5VVW2 1013 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 UNC93AQ86WB7 457 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 LPCAT1Q8NF37 534 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZNF431Q8TF32 576 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 HASPINQ8TF76 798 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 C1GALT1C1Q96EU7 318 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ASIC4Q96FT7 647 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 COL21A1Q96P44 957 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 GALNT9Q9HCQ5 603 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 FARSBQ9NSD9 589 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TREX1Q9NSU2 369 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 PCDHGB1Q9Y5G3 927 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 LOC102723532A0A0G2JNH3 316 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 A0A1W2PQL4 384 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 LEUTXA8MZ59 168 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 WBP4O75554 376 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 GSTM1P09488 218 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 FPR1P21462 350 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR1E2P47887 323 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TAF6P49848 677 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 CAV3P56539 151 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 VLDLRP98155 873 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 HNRNPA0Q13151 305 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SNTA1Q13424 505 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 KLHL12Q53G59 568 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SPRYD7Q5W111 196 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 FAM122CQ6P4D5 195 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SHQ1Q6PI26 577 aaKnown RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ARSKQ6UWY0 536 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 ZNF767PQ75MW2 155 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 TAGAPQ8N103 731 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 OR4F6Q8NGB9 312 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 EXOC2Q96KP1 924 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 FEVQ99581 238 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 INPP5KQ9BT40 448 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 C11orf84Q9BUA3 381 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 C2orf49Q9BVC5 232 aaPredicted RBP9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SPATA9Q9BWV2 254 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 RACGAP1Q9H0H5 632 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 MROH8Q9H579 483 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 BEX1Q9HBH7 125 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 NPAP1Q9NZP6 1156 aa9.5□□□□□ -0.89
TNFAIP3-210ENST00000620204 SAMD4AQ9UPU9 718 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms