RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 GCAP28676 217 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 BOP1Q14137 746 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 IQCCQ4KMZ1 466 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 XKR4Q5GH76 650 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 COQ5Q5HYK3 327 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SLC25A24Q6NUK1 477 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ZNF783Q6ZMS7 281 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 LILRA2Q8N149 483 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 WDTC1Q8N5D0 677 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SPATA22Q8NHS9 363 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SUN5Q8TC36 379 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 GNPDA2Q8TDQ7 276 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 CCDC107Q8WV48 283 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ASPNQ9BXN1 380 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SLC29A3Q9BZD2 475 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 IL20Q9NYY1 176 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 AASSQ9UDR5 926 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 MAGEB17A8MXT2 336 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 NT5C1B-RDH14C9J2C7 533 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ARPC2O15144 300 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TLX2O43763 284 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 CDK14O94921 469 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 RBM34P42696 430 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 NSG1P42857 185 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TARDBPQ13148 414 aaKnown RBP eCLIP2.98□□□□□ -1.93
LPP-221ENST00000618621 DNASE1L3Q13609 305 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ZNF404Q494X3 552 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 NCCRP1Q6ZVX7 275 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 DPY19L4Q7Z388 723 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 PHACTR4Q8IZ21 702 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ZNF655Q8N720 491 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 ANKLE1Q8NAG6 615 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 FAM156AQ8NDB6 213 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 GTPBP3Q969Y2 492 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 LGALS12Q96DT0 336 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 PEBP4Q96S96 227 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ACTR6Q9GZN1 396 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SEC14L3Q9UDX4 400 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ASF1AQ9Y294 204 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 A0A0X1KG70 313 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TMEM221A6NGB7 291 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 FZD9O00144 591 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 GABRDO14764 452 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 DFNA5O60443 496 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 DUSP11O75319 330 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 RFPL2O75678 378 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 FPR1P21462 350 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ARSFP54793 590 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TAS2R39P59534 338 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ZNF630Q2M218 657 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 WDR45BQ5MNZ6 344 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 REEP3Q6NUK4 255 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 AHSA2Q719I0 299 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 MEIOBQ8N635 442 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 HS6ST2Q96MM7 605 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 FCRL3Q96P31 734 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 CITED4Q96RK1 184 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TM9SF2Q99805 663 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ARMC1Q9NVT9 282 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SIX4Q9UIU6 781 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 A0A0J9YVX5 310 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 C1QTNF3-AMACRE9PGA6 284 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 KPNA3O00505 521 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 KLF8O95600 359 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 ZBTB48P10074 688 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 BPIFB3P59826 476 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 IRF9Q00978 393 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SMCO1Q147U7 214 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 PPP1R3AQ16821 1122 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 CTC1Q2NKJ3 1217 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ATAT1Q5SQI0 421 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 NOL9Q5SY16 702 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 FAM182AQ5T1J6 154 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TAF8Q7Z7C8 310 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 FIBCD1Q8N539 461 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 CHCHD6Q9BRQ6 235 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 DCSTAMPQ9H295 470 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 SMURF2Q9HAU4 748 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TCAF2A6NFQ2 919 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ENSAO43768 121 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 NME6O75414 186 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 MYF6P23409 242 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 VARSP26640 1264 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 AQP1P29972 269 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 PPM1AP35813 382 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 YAP1P46937 504 aaKnown RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 SLITRK4Q8IW52 837 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 CFAP52Q8N1V2 620 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 MINDY1Q8N5J2 469 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ZNF431Q8TF32 576 aaPredicted RBP2.98□□□□□ -1.93
LPP-221ENST00000618621 TSSK3Q96PN8 268 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 C1QTNF1Q9BXJ1 281 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TNCP24821 2201 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 FFAR2O15552 330 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TREHO43280 583 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 TFAP2AP05549 437 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 ADH1AP07327 375 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 PSKH1P11801 424 aa2.98□□□□□ -1.93
LPP-221ENST00000618621 CBX5P45973 191 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms