RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RWDD3Q9Y3V2 267 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 GNG14A0A1W2PPG7 69 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 GNGT2O14610 69 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ACOX3O15254 700 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 LATO43561 262 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 POP7O75817 140 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 AP2A2O94973 939 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 NPPAP01160 153 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 NTRK1P04629 796 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ZNF8P17098 575 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 TBPL1P62380 186 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 COL9A2Q14055 689 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 ELAVL3Q14576 367 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 RBM44Q6ZP01 1051 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 TBC1D21Q8IYX1 336 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 TRIML2Q8N7C3 387 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 TERB1Q8NA31 727 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 WFIKKN2Q8TEU8 576 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CMTM7Q96FZ5 175 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 KXD1Q9BQD3 176 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 PAIP1Q9H074 479 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 SERHLQ9NQF3 203 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 BTBD3Q9Y2F9 522 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 DOCK8Q8NF50 2099 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 MYO10Q9HD67 2058 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CXorf51AA0A1B0GTR3 108 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 TSPAN11A1L157 253 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 C5orf67F2Z3F1 127 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CXCR6O00574 342 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 TGFB1P01137 390 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 GSTT1P30711 240 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 MTHFRP42898 656 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 KIR3DL1P43629 444 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 YAP1P46937 504 aaKnown RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 CNTN1Q12860 1018 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 MERTKQ12866 999 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 RUNDC3AQ59EK9 446 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 EGFLAMQ63HQ2 1017 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ANGPTL8Q6UXH0 198 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CHST15Q7LFX5 561 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 ZNF547Q8IVP9 402 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CHPFQ8IZ52 775 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 ZNF740Q8NDX6 193 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 OR8J3Q8NGG0 315 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 HUS1BQ8NHY5 278 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 NETO1Q8TDF5 533 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 TMBIM1Q969X1 311 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 LRIG1Q96JA1 1093 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 CCDC138Q96M89 665 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 COQ10AQ96MF6 247 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 MYOCQ99972 504 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 DPH2Q9BQC3 489 aaPredicted RBP12.01□□□□□ -0.49
CIITA-212ENST00000618207 SH3BP4Q9P0V3 963 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 NINQ8N4C6 2090 aa12.01□□□□□ -0.49
CIITA-212ENST00000618207 EDDM13A0A1B0GTR0 161 aa12□□□□□ -0.49
CIITA-212ENST00000618207 NPC1O15118 1278 aa12□□□□□ -0.49
CIITA-212ENST00000618207 SLC16A5O15375 505 aa12□□□□□ -0.49
CIITA-212ENST00000618207 CLOCKO15516 846 aa12□□□□□ -0.49
CIITA-212ENST00000618207 NOBOXO60393 691 aa12□□□□□ -0.49
CIITA-212ENST00000618207 C1orf105O95561 183 aa12□□□□□ -0.49
CIITA-212ENST00000618207 TCF3P15923 654 aa12□□□□□ -0.49
CIITA-212ENST00000618207 PRKACGP22612 351 aa12□□□□□ -0.49
CIITA-212ENST00000618207 SEC13P55735 322 aa12□□□□□ -0.49
CIITA-212ENST00000618207 RPS13P62277 151 aaKnown RBP12□□□□□ -0.49
CIITA-212ENST00000618207 FOXD4Q12950 439 aaPredicted RBP12□□□□□ -0.49
CIITA-212ENST00000618207 LAPTM4AQ15012 233 aa12□□□□□ -0.49
CIITA-212ENST00000618207 SHHQ15465 462 aa12□□□□□ -0.49
CIITA-212ENST00000618207 FAM98BQ52LJ0 330 aaKnown RBP12□□□□□ -0.49
CIITA-212ENST00000618207 CARM1Q86X55 608 aa12□□□□□ -0.49
CIITA-212ENST00000618207 TSPAN14Q8NG11 270 aa12□□□□□ -0.49
CIITA-212ENST00000618207 OR7G3Q8NG95 312 aa12□□□□□ -0.49
CIITA-212ENST00000618207 TFAP2CQ92754 450 aa12□□□□□ -0.49
CIITA-212ENST00000618207 GLMNQ92990 594 aa12□□□□□ -0.49
CIITA-212ENST00000618207 LGR4Q9BXB1 951 aa12□□□□□ -0.49
CIITA-212ENST00000618207 PBX4Q9BYU1 374 aa12□□□□□ -0.49
CIITA-212ENST00000618207 PLA2G2FQ9BZM2 168 aa12□□□□□ -0.49
CIITA-212ENST00000618207 OLAHQ9NV23 265 aa12□□□□□ -0.49
CIITA-212ENST00000618207 ERVK-11Q9UQG0 969 aa12□□□□□ -0.49
CIITA-212ENST00000618207 ASF1AQ9Y294 204 aa12□□□□□ -0.49
CIITA-212ENST00000618207 SLC27A6Q9Y2P4 619 aa12□□□□□ -0.49
CIITA-212ENST00000618207 USP34Q70CQ2 3546 aa12□□□□□ -0.49
CIITA-212ENST00000618207 IGLON5A6NGN9 336 aa12□□□□□ -0.49
CIITA-212ENST00000618207 LINC01565O15544 149 aa12□□□□□ -0.49
CIITA-212ENST00000618207 ZNF682O95780 498 aa12□□□□□ -0.49
CIITA-212ENST00000618207 SERPINA1P01009 418 aa12□□□□□ -0.49
CIITA-212ENST00000618207 CST1P01037 141 aa12□□□□□ -0.49
CIITA-212ENST00000618207 LAMP1P11279 417 aa12□□□□□ -0.49
CIITA-212ENST00000618207 PRPS2P11908 318 aa12□□□□□ -0.49
CIITA-212ENST00000618207 ITGB7P26010 798 aa12□□□□□ -0.49
CIITA-212ENST00000618207 P2RY2P41231 377 aa12□□□□□ -0.49
CIITA-212ENST00000618207 ATP6AP1Q15904 470 aa12□□□□□ -0.49
CIITA-212ENST00000618207 UGT8Q16880 541 aa12□□□□□ -0.49
CIITA-212ENST00000618207 GGTA1PQ4G0N0 100 aa12□□□□□ -0.49
CIITA-212ENST00000618207 CDKL4Q5MAI5 379 aa12□□□□□ -0.49
CIITA-212ENST00000618207 TMTC4Q5T4D3 741 aa12□□□□□ -0.49
CIITA-212ENST00000618207 METTL2BQ6P1Q9 378 aaKnown RBP12□□□□□ -0.49
CIITA-212ENST00000618207 TTC33Q6PID6 262 aaPredicted RBP12□□□□□ -0.49
CIITA-212ENST00000618207 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12□□□□□ -0.49
CIITA-212ENST00000618207 FAM83HQ6ZRV2 1179 aaPredicted RBP12□□□□□ -0.49
CIITA-212ENST00000618207 TMEM132CQ8N3T6 1108 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms