RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 GNALP38405 381 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 MAGEA12P43365 314 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 CLCNKBP51801 687 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 RPA4Q13156 261 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 PAFAH1B3Q15102 231 aaKnown RBP10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 HSD17B12Q53GQ0 312 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 CLEC12AQ5QGZ9 265 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 CES5AQ6NT32 575 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 HMBOX1Q6NT76 420 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF782Q6ZMW2 699 aaPredicted RBP10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 GHDCQ8N2G8 530 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 TMEM199Q8N511 208 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 AQP11Q8NBQ7 271 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 OR4F6Q8NGB9 312 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 DDX1Q92499 740 aaKnown RBP10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 KXD1Q9BQD3 176 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 BRD7Q9NPI1 651 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 TRIM36Q9NQ86 728 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 NUDT15Q9NV35 164 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 SLC2A6Q9UGQ3 507 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 PPIEQ9UNP9 301 aaKnown RBP10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 HCN4Q9Y3Q4 1203 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 MYOM1P52179 1685 aa10.4□□□□□ -0.75
CLTCL1-209ENST00000617103 MANSC4A6NHS7 340 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZSCAN5BA6NJL1 495 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 HAS3O00219 553 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CACNB4O00305 520 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CDC7O00311 574 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TLX2O43763 284 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CHRM1P11229 460 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 S100A2P29034 98 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CREMQ03060 361 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF155Q12901 538 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 SEMA3AQ14563 771 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 NDUFA9Q16795 377 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF678Q5SXM1 525 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZCCHC12Q6PEW1 402 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PIM3Q86V86 326 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FAM46DQ8NEK8 389 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF675Q8TD23 568 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ACOT12Q8WYK0 555 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TWNKQ96RR1 684 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TMED9Q9BVK6 235 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ADAM7Q9H2U9 754 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 SOX17Q9H6I2 414 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TPT1P8Q9HAU6 139 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TRPV4Q9HBA0 871 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FAM120CQ9NX05 1096 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CDC14AQ9UNH5 594 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 KLRG2A4D1S0 409 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 LCHNA4D1U4 455 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 POP4O95707 220 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ALDOAP04075 364 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GABRR2P28476 465 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 HOXD13P35453 343 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TOMM20Q15388 145 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 RAB12Q6IQ22 244 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PAQR7Q86WK9 346 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 TXNDC5Q8NBS9 432 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 OR10Q1Q8NGQ4 319 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GATA6Q92908 595 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FAM129BQ96TA1 746 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 EFCAB11Q9BUY7 163 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 DERL2Q9GZP9 239 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PHPT1Q9NRX4 125 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CFAP97Q9P2B7 532 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GTF2IRD1Q9UHL9 959 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 MSCO60682 206 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GATBO75879 557 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 HTR1EP28566 365 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GRIA2P42262 883 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GRK6P43250 576 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ST3GAL4Q11206 333 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FAM182AQ5T1J6 154 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PRPF38BQ5VTL8 546 aaKnown RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 CCSAPQ6IQ19 270 aaPredicted RBP10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PQLC3Q8N755 202 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 OR6K6Q8NGW6 343 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 THAP6Q8TBB0 222 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 MSANTD3Q96H12 275 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF599Q96NL3 588 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GAL3ST1Q99999 423 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 SMOXQ9NWM0 555 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FNIP2Q9P278 1114 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FBXW2Q9UKT8 454 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 DCCP43146 1447 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PDHA2P29803 388 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PPP5CP53041 499 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 RELAQ04206 551 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 EFR3AQ14156 821 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PLEKHG7Q6ZR37 379 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ZNF367Q7RTV3 350 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 LRRC70Q7Z2Q7 622 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 GPC2Q8N158 579 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 FIBCD1Q8N539 461 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ASB12Q8WXK4 309 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PYCR2Q96C36 320 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 ALPK1Q96QP1 1244 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 PCBD2Q9H0N5 130 aa10.39□□□□□ -0.75
CLTCL1-209ENST00000617103 XKR8Q9H6D3 395 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms