RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 MFAP5Q13361 173 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 NAA25Q14CX7 972 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 TLR1Q15399 786 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 TPSAB1Q15661 275 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 ANKRD20A4Q4UJ75 823 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 ACSBG2Q5FVE4 666 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 ATG9BQ674R7 924 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 LAPTM4BQ86VI4 370 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 CATSPER1Q8NEC5 780 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 FAR1Q8WVX9 515 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 CABS1Q96KC9 395 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 PLCD4Q9BRC7 762 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 MRPS30Q9NP92 439 aaKnown RBP19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 ZKSCAN5Q9Y2L8 839 aa19.79■□□□□ 0.76
TRAPPC3-208ENST00000616074 DIDO1Q9BTC0 2240 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 IGKV1-8A0A0C4DH67 115 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 MYO1CO00159 1063 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 FFAR3O14843 346 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 GPR42O15529 346 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 PSIP1O75475 530 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 COX6A1P12074 109 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 EDN3P14138 238 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 OGNP20774 298 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 ADARP55265 1226 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 HKDC1Q2TB90 917 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 KLHL38Q2WGJ6 581 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 KIAA0930Q6ICG6 404 aaPredicted RBP19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 PAQR7Q86WK9 346 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 SMPDL3AQ92484 453 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 TCF12Q99081 682 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 OSGIN2Q9Y236 505 aa19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 RUVBL1Q9Y265 456 aaKnown RBP19.78■□□□□ 0.76
TRAPPC3-208ENST00000616074 LRBAP50851 2863 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 PFDN6O15212 129 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 AVILO75366 819 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 VPS26AO75436 327 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 RPA3P35244 121 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 EMP3P54852 163 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 CDK16Q00536 496 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 TSTA3Q13630 321 aaPredicted RBP19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 CENPUQ71F23 418 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 KBTBD2Q8IY47 623 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 CSNK1A1LQ8N752 337 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 LMF1Q96S06 567 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 PKP4Q99569 1192 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 TRIM56Q9BRZ2 755 aaKnown RBP19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 TAC3Q9UHF0 121 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 CPAMD8Q8IZJ3 1885 aa19.77■□□□□ 0.76
TRAPPC3-208ENST00000616074 NSG1A0A0A6YYJ2 146 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 IDSB3KWA1 339 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 E5RI56 91 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 LRRTM2O43300 516 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 PHF2O75151 1096 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 USP1O94782 785 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 F7P08709 466 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 PKMP14618 531 aaKnown RBP19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 EEF1A2Q05639 463 aaKnown RBP19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 DSG2Q14126 1118 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 KCNJ11Q14654 390 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 ARHGAP19Q14CB8 494 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 TRIP13Q15645 432 aaPredicted RBP19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 ICE2Q659A1 982 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 ZNF425Q6IV72 752 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 FAM180AQ6UWF9 173 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 NDUFAF7Q7L592 441 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 CILP2Q8IUL8 1156 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 SPNS2Q8IVW8 549 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 PPFIBP2Q8ND30 876 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 BRIX1Q8TDN6 353 aaKnown RBP19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 MAIP1Q8WWC4 291 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 PSMF1Q92530 271 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 MVB12AQ96EY5 273 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 SLC30A3Q99726 388 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 YIPF2Q9BWQ6 316 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 LZTFL1Q9NQ48 299 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 FAM114A2Q9NRY5 505 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 PTGFRNQ9P2B2 879 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 TRPC4Q9UBN4 977 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 CDC14AQ9UNH5 594 aa19.76■□□□□ 0.75
TRAPPC3-208ENST00000616074 CATP04040 527 aaKnown RBP19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 PRR35P0CG20 571 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 SOX11P35716 441 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 CLCN7P51798 805 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 PNLIPRP1P54315 467 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 EMP2P54851 167 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 ARG2P78540 354 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 PRDX1Q06830 199 aaKnown RBP19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 RPUSD3Q6P087 351 aaKnown RBP19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 REXO1L1PQ8IX06 675 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 AMER3Q8N944 861 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 OR1N1Q8NGS0 311 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 GIMAP7Q8NHV1 300 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 MMABQ96EY8 250 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 OR2A5Q96R48 311 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 SLX1AQ9BQ83 275 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 C14orf105Q9NVL8 296 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 PLA2G3Q9NZ20 509 aa19.75■□□□□ 0.75
TRAPPC3-208ENST00000616074 IGHV1-45A0A0A0MS14 117 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 A0A1W2PQ72 361 aa19.74■□□□□ 0.75
TRAPPC3-208ENST00000616074 PRPF4O43172 522 aaKnown RBP eCLIP19.74■□□□□ 0.751e-9■■■■■ 35.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms