RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 PRUNE2Q8WUY3 3088 aa18.53■□□□□ 0.56
MMP28-204ENST00000615136 TRIM64CA6NLI5 447 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 POP7O75817 140 aaKnown RBP18.52■□□□□ 0.56
MMP28-204ENST00000615136 KCNH1O95259 989 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 C1orf105O95561 183 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 PCCBP05166 539 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 GNAO1P09471 354 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 TACR1P25103 407 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.52■□□□□ 0.56
MMP28-204ENST00000615136 KIAA1211LQ6NV74 962 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 RIMKLAQ8IXN7 391 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 TNIP2Q8NFZ5 429 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 SLC6A17Q9H1V8 727 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 RSPH9Q9H1X1 276 aaPredicted RBP18.52■□□□□ 0.56
MMP28-204ENST00000615136 PIF1Q9H611 641 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 SNX6Q9UNH7 406 aa18.52■□□□□ 0.56
MMP28-204ENST00000615136 TRIM64A6NGJ6 449 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 CLGNO14967 610 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 JUPP14923 745 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 GGT1P19440 569 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 KIR2DL1P43626 348 aaPredicted RBP18.52■□□□□ 0.55
MMP28-204ENST00000615136 DOC2AQ14183 400 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 MAP7Q14244 749 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 WSCD2Q2TBF2 565 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 FAM174BQ3ZCQ3 159 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 XKR6Q5GH73 641 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 SPANXN4Q5MJ08 99 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 CES5AQ6NT32 575 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 HEATR4Q86WZ0 1026 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 RALGPS2Q86X27 583 aaPredicted RBP18.52■□□□□ 0.55
MMP28-204ENST00000615136 GTF2H4Q92759 462 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 COX14Q96I36 57 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 HIC2Q96JB3 615 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 NRTNQ99748 197 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 CHID1Q9BWS9 393 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 MBNL1Q9NR56 388 aaKnown RBP18.52■□□□□ 0.55
MMP28-204ENST00000615136 TM7SF3Q9NS93 570 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 TUBA8Q9NY65 449 aaPredicted RBP18.52■□□□□ 0.55
MMP28-204ENST00000615136 VAPAQ9P0L0 249 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 THEGQ9P2T0 379 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 SH2B3Q9UQQ2 575 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 CEPT1Q9Y6K0 416 aa18.52■□□□□ 0.55
MMP28-204ENST00000615136 A0A1W2PP55 124 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 CCDC85CA6NKD9 419 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 PCDH8O95206 1070 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 BMP10O95393 424 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 IRF8Q02556 426 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 CAMK2GQ13555 558 aaPredicted RBP18.51■□□□□ 0.55
MMP28-204ENST00000615136 PYCR3Q53H96 274 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 FRG2Q64ET8 278 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 PNCKQ6P2M8 343 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 TRIML2Q8N7C3 387 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 OR56A3Q8NH54 315 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 ZNF480Q8WV37 535 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 RAB7BQ96AH8 199 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 ZNF583Q96ND8 569 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 FRG2BQ96QU4 278 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 ZCCHC2Q9C0B9 1178 aaKnown RBP18.51■□□□□ 0.55
MMP28-204ENST00000615136 CLMPQ9H6B4 373 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 SMPD3Q9NY59 655 aaPredicted RBP18.51■□□□□ 0.55
MMP28-204ENST00000615136 SLC23A2Q9UGH3 650 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 NUMA1Q14980 2115 aa18.51■□□□□ 0.55
MMP28-204ENST00000615136 CCDC160A6NGH7 325 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 DFNA5O60443 496 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 B3GALT4O96024 378 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 IL6P05231 212 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 ANXA6P08133 673 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 CDH2P19022 906 aaPredicted RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 CACHD1Q5VU97 1274 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 FAM46CQ5VWP2 391 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 TRMT11Q7Z4G4 463 aaKnown RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 HDDC3Q8N4P3 179 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 KLK6Q92876 244 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 EGLN2Q96KS0 407 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 SEPHS2Q99611 448 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 BDH2Q9BUT1 245 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 DPY30Q9C005 99 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 PRSS23O95084 383 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 LTBRP36941 435 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 RPS9P46781 194 aaKnown RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 PHC1P78364 1004 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 FGL2Q14314 439 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 SF1Q15637 639 aaKnown RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 WDR20Q8TBZ3 569 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 MPP4Q96JB8 637 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 LINC00615Q96LM1 132 aaPredicted RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 RNF145Q96MT1 663 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 FOPNLQ96NB1 174 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 MTERF1Q99551 399 aaKnown RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 MKRN2Q9H000 416 aaKnown RBP18.5■□□□□ 0.55
MMP28-204ENST00000615136 BRWD1Q9NSI6 2320 aa18.5■□□□□ 0.55
MMP28-204ENST00000615136 F5P12259 2224 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 CROCCQ5TZA2 2017 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 TNRC18O15417 2968 aaPredicted RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 CAPGP40121 348 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 GTF2H3Q13889 308 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 MAPKAPK3Q16644 382 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 ZNF548Q8NEK5 533 aaPredicted RBP18.49■□□□□ 0.55
MMP28-204ENST00000615136 OR2L2Q8NH16 312 aa18.49■□□□□ 0.55
MMP28-204ENST00000615136 APOLD1Q96LR9 279 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms