RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 MMACHCQ9Y4U1 282 aa2.96□□□□□ -1.94
CBWD3-209ENST00000614377 PCDHAC2Q9Y5I4 1007 aa2.96□□□□□ -1.94
CBWD3-209ENST00000614377 RNF215Q9Y6U7 377 aa2.96□□□□□ -1.94
CBWD3-209ENST00000614377 RPTORQ8N122 1335 aa2.96□□□□□ -1.94
CBWD3-209ENST00000614377 CHD2O14647 1828 aaKnown RBP2.96□□□□□ -1.94
CBWD3-209ENST00000614377 MAP2P11137 1827 aaKnown RBP2.96□□□□□ -1.94
CBWD3-209ENST00000614377 A0A0A6YYK5 440 aaPredicted RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 GNG14A0A1W2PPG7 69 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 A0A1W2PQ09 198 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TRIM49BA6NDI0 452 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 GABRR3A8MPY1 467 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 A8MUA0 341 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 A8MXQ7 604 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 H7C4K7 107 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 PRRG1O14668 218 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SUV39H1O43463 412 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 KCNQ3O43525 872 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ENTPD3O75355 529 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ENTPD5O75356 428 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ITGA10O75578 1167 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 LDLRP01130 860 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 S100A8P05109 93 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 CELA3AP09093 270 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZDHHC11BP0C7U3 371 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF30P17039 623 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 MMP8P22894 467 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 IGFBP5P24593 272 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 EPHA8P29322 1005 aaPredicted RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 CDKN2CP42773 168 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 NSFP46459 744 aaKnown RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 EPHA5P54756 1037 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SNU13P55769 128 aaKnown RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SOX10P56693 466 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 COPZ1P61923 177 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 EGR3Q06889 387 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 OVGP1Q12889 678 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SRSF5Q13243 272 aaKnown RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ASAH1Q13510 395 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 VEZF1Q14119 521 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 PDK3Q15120 406 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 GPR68Q15743 365 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 DEFB115Q30KQ5 88 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 MOGAT2Q3SYC2 334 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF568Q3ZCX4 644 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ACSBG2Q5FVE4 666 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZNF311Q5JNZ3 666 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TTC38Q5R3I4 469 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 LDLRAP1Q5SW96 308 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 PIP5KL1Q5T9C9 394 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 BROXQ5VW32 411 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 RRAGBQ5VZM2 374 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZDHHC20Q5W0Z9 365 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ATG16L1Q676U5 607 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SEL1L3Q68CR1 1132 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 FRMPD2BQ6IN97 320 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TCEAL6Q6IPX3 200 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 IL20RBQ6UXL0 311 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TMIGD1Q6UXZ0 262 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 LIPIQ6XZB0 460 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SSX9Q7RTT3 188 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 FOXRED2Q8IWF2 684 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 C16orf71Q8IYS4 520 aaPredicted RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 OR2L5Q8NG80 312 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TAS1R2Q8TE23 839 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SLC22A17Q8WUG5 538 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 CASKIN2Q8WXE0 1202 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ING5Q8WYH8 240 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 HAS1Q92839 578 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZHX1-C8orf76Q96EF9 292 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 MARS2Q96GW9 593 aaKnown RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 C5orf34Q96MH7 638 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ZSWIM3Q96MP5 696 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 RILPQ96NA2 401 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 KLHL5Q96PQ7 755 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 HHIPQ96QV1 700 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TAAR6Q96RI8 345 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 KCNA7Q96RP8 456 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SEMA3CQ99985 751 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SH2D3AQ9BRG2 576 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 NAA11Q9BSU3 229 aaPredicted RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 EFHD1Q9BUP0 239 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TRIM31Q9BZY9 425 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 PCED1AQ9H1Q7 454 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 VAT1LQ9HCJ6 419 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 GDF3Q9NR23 364 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 TREX1Q9NSU2 369 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 RBM12Q9NTZ6 932 aaKnown RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 POT1Q9NUX5 634 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SETD4Q9NVD3 440 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 PLA2G3Q9NZ20 509 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 LRP2BPQ9P2M1 347 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 KLQ9UEF7 1012 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ENPP5Q9UJA9 477 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 STOML2Q9UJZ1 356 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 AP4B1Q9Y6B7 739 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 DENND4BO75064 1496 aaPredicted RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 ERVK-7P63135 1459 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SPEF2Q9C093 1822 aa2.95□□□□□ -1.94
CBWD3-209ENST00000614377 SUPT6HQ7KZ85 1726 aaKnown RBP2.95□□□□□ -1.94
CBWD3-209ENST00000614377 CUX1P39880 1505 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms