RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 SIAH1Q8IUQ4 282 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 CHERPQ8IWX8 916 aaKnown RBP19.66■□□□□ 0.74
CTDP1-208ENST00000613122 RAB7BQ96AH8 199 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 ZSWIM3Q96MP5 696 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 HEXBP07686 556 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 RAP2AP10114 183 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 RAB8AP61006 207 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 ARF5P84085 180 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 IL18R1Q13478 541 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 USP30Q70CQ3 517 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 PIM3Q86V86 326 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 KBTBD6Q86V97 674 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 IQCF2Q8IXL9 164 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 TRPV1Q8NER1 839 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 OMA1Q96E52 524 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 COL1A1P02452 1464 aaPredicted RBP19.66■□□□□ 0.74
CTDP1-208ENST00000613122 GATBO75879 557 aaKnown RBP19.66■□□□□ 0.74
CTDP1-208ENST00000613122 KLHL22Q53GT1 634 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 TMIGD1Q6UXZ0 262 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 CDH24Q86UP0 819 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 AMIGO1Q86WK6 493 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 CLDN19Q8N6F1 224 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 C1orf74Q96LT6 269 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 POLR2J3Q9H1A7 115 aaKnown RBP19.66■□□□□ 0.74
CTDP1-208ENST00000613122 VBP1P61758 197 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 COLEC12Q5KU26 742 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 C6orf52Q5T4I8 152 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 GOLGA7Q7Z5G4 137 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 LRRC3Q9BY71 257 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 WDR12Q9GZL7 423 aaKnown RBP19.66■□□□□ 0.74
CTDP1-208ENST00000613122 IFT46Q9NQC8 304 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 NKIRAS2Q9NYR9 191 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 ACSL5Q9ULC5 683 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 TMED5Q9Y3A6 229 aa19.66■□□□□ 0.74
CTDP1-208ENST00000613122 A0A0D9SEW6 157 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 SOCS5O75159 536 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 GJB5O95377 273 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ZNF20P17024 532 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 SHMT2P34897 504 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 SCRN3Q0VDG4 424 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 GHDCQ8N2G8 530 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ZSCAN1Q8NBB4 408 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ZDHHC12Q96GR4 267 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 TCF7L1Q9HCS4 588 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ING3Q9NXR8 418 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 KNDC1Q76NI1 1749 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 DAPL1A0PJW8 107 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 KHNYNO15037 678 aaKnown RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 JUNP05412 331 aaKnown RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 POLR2CP19387 275 aaPredicted RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 TMEM115Q12893 351 aaPredicted RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 KLF1Q13351 362 aaPredicted RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 KCNJ11Q14654 390 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 PCBP2Q15366 365 aaKnown RBP eCLIP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 FAM43BQ6ZT52 329 aaPredicted RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 AMIGO3Q86WK7 504 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 NECTIN4Q96NY8 510 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 GPR62Q9BZJ7 368 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 HEPACAM2A8MVW5 462 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 GDI2P50395 445 aaKnown RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 MR1Q95460 341 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 TEPSINQ96N21 525 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 OR2M4Q96R27 311 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 KCNH6Q9H252 994 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 NLE1Q9NVX2 485 aaPredicted RBP19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ZNF358Q9NW07 568 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 TELO2Q9Y4R8 837 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 DHFRP00374 187 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ENGP17813 658 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 ZBTB46Q86UZ6 589 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 OR5M3Q8NGP4 307 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 PCYT2Q99447 389 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 KCTD3Q9Y597 815 aa19.65■□□□□ 0.74
CTDP1-208ENST00000613122 VEGFDO43915 354 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 GKP32189 559 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 GMFBP60983 142 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 RAB2AP61019 212 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 OR4F3Q6IEY1 312 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 MAMDC4Q6UXC1 1216 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 ADGRD2Q7Z7M1 963 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 OR5K1Q8NHB7 308 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 DNAJB9Q9UBS3 223 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 CLIC1O00299 241 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 DNM1P34Q6PK57 102 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 SYVN1Q86TM6 617 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 SATL1Q86VE3 508 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 SMARCD2Q92925 531 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 DERL2Q9GZP9 239 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 DKKL1Q9UK85 242 aa19.64■□□□□ 0.74
CTDP1-208ENST00000613122 LOC730098B7Z3J9 87 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 MANBAO00462 879 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 NR2C1P13056 603 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 PNPLA2Q96AD5 504 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 TBC1D17Q9HA65 648 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 HRASLS2Q9NWW9 162 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 CA14Q9ULX7 337 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 STYXL1Q9Y6J8 313 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 C2orf74A8MZ97 194 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 STC1P52823 247 aa19.64■□□□□ 0.73
CTDP1-208ENST00000613122 NIPAL1Q6NVV3 410 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms