RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 RTL9Q8NET4 1388 aa4.35□□□□□ -1.71
SH3D19-213ENST00000604922 HEG1Q9ULI3 1381 aa4.35□□□□□ -1.71
SH3D19-213ENST00000604922 PTPRZ1P23471 2315 aaPredicted RBP4.35□□□□□ -1.71
SH3D19-213ENST00000604922 KMT2BQ9UMN6 2715 aaPredicted RBP4.35□□□□□ -1.71
SH3D19-213ENST00000604922 SIPA1L3O60292 1781 aaPredicted RBP4.35□□□□□ -1.71
SH3D19-213ENST00000604922 LAMB2P55268 1798 aa4.35□□□□□ -1.71
SH3D19-213ENST00000604922 TPRP12270 2363 aaKnown RBP4.34□□□□□ -1.71
SH3D19-213ENST00000604922 CHD9Q3L8U1 2897 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 TRIOO75962 3097 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 LOC101059948A0A1B0GTJ6 334 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 LNP1A1A4G5 178 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 H7C423 109 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 KLF11O14901 512 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 DCXO43602 365 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 CDC123O75794 336 aaPredicted RBP4.34□□□□□ -1.71
SH3D19-213ENST00000604922 GJA1P17302 382 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 SLC6A6P31641 620 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 MAGEA11P43364 429 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 SLC15A1P46059 708 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 PDX1P52945 283 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 NAP1L1P55209 391 aaKnown RBP4.34□□□□□ -1.71
SH3D19-213ENST00000604922 SIRPAP78324 504 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 CX3CL1P78423 397 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 NR1D2Q14995 579 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 RAB41Q5JT25 222 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 GRTP1Q5TC63 336 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 METTL7BQ6UX53 244 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 COMMD2Q86X83 199 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 GRHL3Q8TE85 626 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 ZNF689Q96CS4 500 aaPredicted RBP4.34□□□□□ -1.71
SH3D19-213ENST00000604922 PRAC1Q96KF2 57 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 NEK1Q96PY6 1258 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 SYT15Q9BQS2 421 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 C16orf70Q9BSU1 422 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 VN1R1Q9GZP7 353 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 NYXQ9GZU5 481 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 SPATC1LQ9H0A9 340 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 P2RY12Q9H244 342 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 OSGEPL1Q9H4B0 414 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 DBNDD1Q9H9R9 158 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 POLKQ9UBT6 870 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 ZNF148Q9UQR1 794 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 GRIP1Q9Y3R0 1128 aa4.34□□□□□ -1.71
SH3D19-213ENST00000604922 ZNF318Q5VUA4 2279 aa4.34□□□□□ -1.72
SH3D19-213ENST00000604922 ZFHX4Q86UP3 3567 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ATRXP46100 2492 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 CACNA1FO60840 1977 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 OTOFQ9HC10 1997 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 DDX60LQ5H9U9 1706 aaKnown RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ABCC4O15439 1325 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 GAPDHSO14556 408 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PRAMEF11O60813 436 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 TPOP07202 933 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 SLC6A12P48065 614 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 HERV-K104P61576 105 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 UBXN2AP68543 259 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PNRC1Q12796 327 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PLEKHS1Q5SXH7 462 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 DHRS7BQ6IAN0 325 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PSRC1Q6PGN9 363 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 LDB1Q86U70 411 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ZNF440Q8IYI8 595 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ZNF843Q8N446 348 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ZNF614Q8N883 585 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 MOSPD2Q8NHP6 518 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 HPSE2Q8WWQ2 592 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PPIL3Q9H2H8 161 aaKnown RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PSD3Q9NYI0 1048 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 SUCLA2Q9P2R7 463 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 THEGQ9P2T0 379 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ZDHHC2Q9UIJ5 367 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 ZNF215Q9UL58 517 aaPredicted RBP4.33□□□□□ -1.72
SH3D19-213ENST00000604922 PLAGL1Q9UM63 463 aa4.33□□□□□ -1.72
SH3D19-213ENST00000604922 IBTKQ9P2D0 1353 aaPredicted RBP4.32□□□□□ -1.72
SH3D19-213ENST00000604922 IGLV7-46A0A075B6I9 117 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 HYKKA2RU49 373 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 CTDSP2O14595 271 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 XRCC3O43542 346 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 ECE2O60344 883 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 TSPAN1O60635 241 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 BBOX1O75936 387 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 CA6P23280 308 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 TNNT2P45379 298 aaPredicted RBP4.32□□□□□ -1.72
SH3D19-213ENST00000604922 PNLIPRP2P54317 469 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 CDK3Q00526 305 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 HNRNPDQ14103 355 aaKnown RBP4.32□□□□□ -1.72
SH3D19-213ENST00000604922 SGSM1Q2NKQ1 1148 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 KRT71Q3SY84 523 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 Q6ZSR9 355 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 FAM114A1Q8IWE2 563 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 RPAP2Q8IXW5 612 aaPredicted RBP4.32□□□□□ -1.72
SH3D19-213ENST00000604922 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 RAB42Q8N4Z0 105 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 MCUQ8NE86 351 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 RAET1EQ8TD07 263 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 SKA1Q96BD8 255 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 MOCOSQ96EN8 888 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 ATOH8Q96SQ7 321 aa4.32□□□□□ -1.72
SH3D19-213ENST00000604922 SYT11Q9BT88 431 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms