RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FIBINQ8TAL6 211 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 GABARAPL1Q9H0R8 117 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 PALMDQ9NP74 551 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 CHCHD3Q9NX63 227 aaKnown RBP19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 SH3BP1Q9Y3L3 701 aa19.62■□□□□ 0.73
SHKBP1-225ENST00000600733 TOR1BO14657 336 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 UGT2B11O75310 529 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 SULT1C4O75897 302 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 CD22P20273 847 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 WNT3P56703 355 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 SMN1Q16637 294 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 VMACQ2NL98 169 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 CHPT1Q8WUD6 406 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 TMEM169Q96HH4 297 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 ZNF641Q96N77 438 aaPredicted RBP19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 MTERF1Q99551 399 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 TM9SF3Q9HD45 589 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 MRPL17Q9NRX2 175 aaKnown RBP19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 ERGIC3Q9Y282 383 aa19.61■□□□□ 0.73
SHKBP1-225ENST00000600733 M0QX08 132 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 YY2O15391 372 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 SCN2BO60939 215 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 CPSF4O95639 269 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 GJA1P17302 382 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PRPS1L1P21108 318 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 ALDH4A1P30038 563 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PFN3P60673 137 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 LSM3P62310 102 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 GSTM4Q03013 218 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 DDX39BQ13838 428 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 NPTX1Q15818 432 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 MPPE1Q53F39 396 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 CAPN13Q6MZZ7 669 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 C22orf39Q6P5X5 142 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PTOV1Q86YD1 416 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 TMCO5AQ8N6Q1 288 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 SETD9Q8NE22 299 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 CSGALNACT1Q8TDX6 532 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 MCCC1Q96RQ3 725 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 SMG9Q9H0W8 520 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PDP1Q9P0J1 537 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 B4GALT6Q9UBX8 382 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PCDHGA10Q9Y5H3 936 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PRRC2BQ5JSZ5 2229 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 MICAL3Q7RTP6 2002 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 FUOMA2VDF0 154 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 MAGEB17A8MXT2 336 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 GFYI3L273 518 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 EIF3FO00303 357 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 EPN2O95208 641 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 FABP3P05413 133 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 ATP1B2P14415 290 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 HOXB6P17509 224 aaKnown RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 HLA-FP30511 346 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 KDELR2P33947 212 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 SPINT3P49223 89 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 ARHGDIAP52565 204 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 SLC35A2P78381 396 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 CCDC81Q6ZN84 652 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 DPY19L3Q6ZPD9 716 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 TCEAL8Q8IYN2 117 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 RORBQ92753 470 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 SH3YL1Q96HL8 342 aaPredicted RBP19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 BRD9Q9H8M2 597 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 PCDHGB1Q9Y5G3 927 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 GMPPBQ9Y5P6 360 aa19.6■□□□□ 0.73
SHKBP1-225ENST00000600733 DNAJB5O75953 348 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 FKBP9O95302 570 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 COX7A2P14406 83 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 JUPP14923 745 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 CYP2A7P20853 494 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HOXD10P28358 340 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HOXA9P31269 272 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 TRPC1P48995 793 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 RGS21Q2M5E4 152 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HTR3DQ70Z44 454 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HORMAD1Q86X24 394 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HS6ST3Q8IZP7 471 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 NDNFQ8TB73 568 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 SCAMP4Q969E2 229 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 POP5Q969H6 163 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 TBC1D20Q96BZ9 403 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HSH2DQ96JZ2 352 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 PCDH12Q9NPG4 1184 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 PPIL1Q9Y3C6 166 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 SAMHD1Q9Y3Z3 626 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 NPIPB8E9PQR5 432 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 SH3BGRLO75368 114 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 SEMG1P04279 462 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 GPX2P18283 190 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 DNAJA1P31689 397 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 RAB15P59190 212 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 IRF8Q02556 426 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 DGCR6Q14129 220 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 MSANTD1Q6ZTZ1 278 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 METTL3Q86U44 580 aaKnown RBP19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 HOMEZQ8IX15 550 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 ELMOD1Q8N336 334 aa19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 TTC29Q8NA56 475 aaPredicted RBP19.59■□□□□ 0.73
SHKBP1-225ENST00000600733 UBE2FQ969M7 185 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms