RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 C9J4A7 227 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 MAP2K7O14733 419 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 KLHL41O60662 606 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 FAM155BO75949 473 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 F7P08709 466 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF8P17098 575 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 RPS3P23396 243 aaKnown RBP eCLIP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 RORAP35398 523 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 PPARGP37231 505 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 GP5P40197 560 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 EIF3BP55884 814 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 Q0VFX4 171 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 ILF2Q12905 390 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 PLCL1Q15111 1095 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 KHDC1Q4VXA5 237 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 GRTP1Q5TC63 336 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 STRA8Q7Z7C7 330 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 ZC3HC1Q86WB0 502 aaKnown RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 CTAGE3PQ8IX95 158 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 PPP4R1Q8TF05 950 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 HEXDCQ8WVB3 486 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 LRFN5Q96NI6 719 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 BIRC8Q96P09 236 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 PAFAH2Q99487 392 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 TTC1Q99614 292 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 COPS8Q99627 209 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 RBBP8Q99708 897 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 SLC7A5P2Q9GIP4 190 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 OR2AG1Q9H205 316 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 GSX1Q9H4S2 264 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 TRIM39Q9HCM9 518 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 FBXO6Q9NRD1 293 aaPredicted RBP13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 PCMTD2Q9NV79 361 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF446Q9NWS9 450 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 ATXN10Q9UBB4 475 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 SLC23A2Q9UGH3 650 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 VPS9D1Q9Y2B5 631 aa13.38□□□□□ -0.27
SHKBP1-218ENST00000598907 HMX2A2RU54 273 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 TLCD2A6NGC4 264 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 TMEM200CA6NKL6 621 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 POC1B-GALNT4F8VUJ3 575 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 PFDN6O15212 129 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 SGTAO43765 313 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 NUAK1O60285 661 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 OR1I1O60431 355 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 ALOX12BO75342 701 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 NDUFS3O75489 264 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 SLC25A14O95258 325 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 BRAFP15056 766 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 NSG1P42857 185 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 MSH2P43246 934 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 CD151P48509 253 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 FOXL2P58012 376 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF844Q08AG5 666 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF549Q6P9A3 640 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 CNSTQ6PJW8 725 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 GFRALQ6UXV0 394 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 RPTNQ6XPR3 784 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 ADGRG6Q86SQ4 1221 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 D2HGDHQ8N465 521 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 OTUD6BQ8N6M0 293 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 BCORP1Q8N888 145 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 RAB33BQ9H082 229 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 RHOJQ9H4E5 214 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 ACTR5Q9H9F9 607 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 MCCC2Q9HCC0 563 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 P4HTMQ9NXG6 502 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 SEMA5BQ9P283 1151 aa13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 CORO1CQ9ULV4 474 aaPredicted RBP13.37□□□□□ -0.27
SHKBP1-218ENST00000598907 AGPSO00116 658 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 PRMT5O14744 637 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 VEGFDO43915 354 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 SASH3O75995 380 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 ZNF7P17097 686 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 CYP2A7P20853 494 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 SPRP35270 261 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 KIR3DL1P43629 444 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 SERPINB9P50453 376 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 TMEM115Q12893 351 aaPredicted RBP13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 CTSL3PQ5NE16 218 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 TMTC4Q5T4D3 741 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 TAOK1Q7L7X3 1001 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 KMT5CQ86Y97 462 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 EPS8L3Q8TE67 593 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 C14orf79Q96F83 325 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 PPM1MQ96MI6 270 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 FANCEQ9HB96 536 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 LGALS13Q9UHV8 139 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 PTRH2Q9Y3E5 179 aaKnown RBP13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 PRSS21Q9Y6M0 314 aa13.36□□□□□ -0.27
SHKBP1-218ENST00000598907 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CHUKO15111 745 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CDH16O75309 829 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 MTX2O75431 263 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 AP2A2O94973 939 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 ESR1P03372 595 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 INHBAP08476 426 aa13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 ATP1B2P14415 290 aaPredicted RBP13.35□□□□□ -0.27
SHKBP1-218ENST00000598907 CD9P21926 228 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms