RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ATP13A5Q4VNC0 1218 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 OR2T5Q6IEZ7 315 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 NEK5Q6P3R8 708 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 CRTC1Q6UUV9 634 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 VTCN1Q7Z7D3 282 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 OR2T29Q8NH02 315 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 SLIRPQ9GZT3 109 aaKnown RBP16.02■□□□□ 0.15
LIG1-206ENST00000594067 AASDHPPTQ9NRN7 309 aa16.02■□□□□ 0.15
LIG1-206ENST00000594067 PIKFYVEQ9Y2I7 2098 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 PRAMEF4O60810 478 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 ITPKAP23677 461 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 ALDH7A1P49419 539 aaKnown RBP16.01■□□□□ 0.15
LIG1-206ENST00000594067 DGCR6Q14129 220 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 GBX1Q14549 363 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 SMN1Q16637 294 aaKnown RBP16.01■□□□□ 0.15
LIG1-206ENST00000594067 PTCHD3Q3KNS1 767 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 DGKKQ5KSL6 1271 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 PRAMEF9Q5VWM5 478 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 TXNDC8Q6A555 127 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 TMEM150AQ86TG1 271 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 RHOXF1Q8NHV9 184 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 ZNF461Q8TAF7 563 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 EFHD2Q96C19 240 aaPredicted RBP16.01■□□□□ 0.15
LIG1-206ENST00000594067 ASIC4Q96FT7 647 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 ZDHHC3Q9NYG2 299 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 GMPPBQ9Y5P6 360 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.01■□□□□ 0.15
LIG1-206ENST00000594067 EVPLLA8MZ36 301 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 GREM1O60565 184 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 MAPK11Q15759 364 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 LRRC66Q68CR7 880 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 VRK3Q8IV63 474 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 SETD9Q8NE22 299 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 TESCQ96BS2 214 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 CMTM7Q96FZ5 175 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 COPS8Q99627 209 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 ASPSCR1Q9BZE9 553 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 SLC22A14Q9Y267 594 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 TPRKBQ9Y3C4 175 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 BACE2Q9Y5Z0 518 aa16.01■□□□□ 0.15
LIG1-206ENST00000594067 ZNF821O75541 412 aaPredicted RBP16■□□□□ 0.15
LIG1-206ENST00000594067 ARHGEF15O94989 841 aa16■□□□□ 0.15
LIG1-206ENST00000594067 ENGP17813 658 aa16■□□□□ 0.15
LIG1-206ENST00000594067 EPHA2P29317 976 aa16■□□□□ 0.15
LIG1-206ENST00000594067 GRK3P35626 688 aa16■□□□□ 0.15
LIG1-206ENST00000594067 KIR3DL1P43629 444 aa16■□□□□ 0.15
LIG1-206ENST00000594067 ARHGDIAP52565 204 aa16■□□□□ 0.15
LIG1-206ENST00000594067 NEK10Q6ZWH5 1172 aa16■□□□□ 0.15
LIG1-206ENST00000594067 PAGE2Q7Z2X7 111 aa16■□□□□ 0.15
LIG1-206ENST00000594067 DNAJB7Q7Z6W7 309 aaPredicted RBP16■□□□□ 0.15
LIG1-206ENST00000594067 CBARPQ8N350 705 aaPredicted RBP16■□□□□ 0.15
LIG1-206ENST00000594067 TET1Q8NFU7 2136 aa16■□□□□ 0.15
LIG1-206ENST00000594067 CDC26Q8NHZ8 85 aa16■□□□□ 0.15
LIG1-206ENST00000594067 NELL1Q92832 810 aa16■□□□□ 0.15
LIG1-206ENST00000594067 RPL3LQ92901 407 aaKnown RBP16■□□□□ 0.15
LIG1-206ENST00000594067 PANX1Q96RD7 426 aa16■□□□□ 0.15
LIG1-206ENST00000594067 DPH2Q9BQC3 489 aaPredicted RBP16■□□□□ 0.15
LIG1-206ENST00000594067 REXO4Q9GZR2 422 aaKnown RBP16■□□□□ 0.15
LIG1-206ENST00000594067 IL1RAPQ9NPH3 570 aa16■□□□□ 0.15
LIG1-206ENST00000594067 PDP1Q9P0J1 537 aaPredicted RBP16■□□□□ 0.15
LIG1-206ENST00000594067 POU2F3Q9UKI9 436 aa16■□□□□ 0.15
LIG1-206ENST00000594067 RBMX2Q9Y388 322 aaKnown RBP16■□□□□ 0.15
LIG1-206ENST00000594067 CLIC1O00299 241 aa16■□□□□ 0.15
LIG1-206ENST00000594067 FPGTO14772 594 aa16■□□□□ 0.15
LIG1-206ENST00000594067 SOCS5O75159 536 aa16■□□□□ 0.15
LIG1-206ENST00000594067 MT-ND2P03891 347 aa16■□□□□ 0.15
LIG1-206ENST00000594067 CBSLP0DN79 551 aa16■□□□□ 0.15
LIG1-206ENST00000594067 AMD1P17707 334 aa16■□□□□ 0.15
LIG1-206ENST00000594067 EFNA1P20827 205 aaPredicted RBP16■□□□□ 0.15
LIG1-206ENST00000594067 PSMB9P28065 219 aa16■□□□□ 0.15
LIG1-206ENST00000594067 CBSP35520 551 aa16■□□□□ 0.15
LIG1-206ENST00000594067 TGFBR1P36897 503 aa16■□□□□ 0.15
LIG1-206ENST00000594067 PPP5CP53041 499 aa16■□□□□ 0.15
LIG1-206ENST00000594067 TPTEP56180 551 aa16■□□□□ 0.15
LIG1-206ENST00000594067 CXCR4P61073 352 aa16■□□□□ 0.15
LIG1-206ENST00000594067 VLDLRP98155 873 aa16■□□□□ 0.15
LIG1-206ENST00000594067 VEPH1Q14D04 833 aa16■□□□□ 0.15
LIG1-206ENST00000594067 LRRC73Q5JTD7 316 aa16■□□□□ 0.15
LIG1-206ENST00000594067 ZNF621Q6ZSS3 439 aa16■□□□□ 0.15
LIG1-206ENST00000594067 LRRC70Q7Z2Q7 622 aa16■□□□□ 0.15
LIG1-206ENST00000594067 SLC43A3Q8NBI5 491 aa16■□□□□ 0.15
LIG1-206ENST00000594067 LGALS12Q96DT0 336 aa16■□□□□ 0.15
LIG1-206ENST00000594067 GABARAPL1Q9H0R8 117 aa16■□□□□ 0.15
LIG1-206ENST00000594067 ATG10Q9H0Y0 220 aa16■□□□□ 0.15
LIG1-206ENST00000594067 DSN1Q9H410 356 aa16■□□□□ 0.15
LIG1-206ENST00000594067 TM9SF3Q9HD45 589 aa16■□□□□ 0.15
LIG1-206ENST00000594067 CPSF4O95639 269 aaKnown RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 FADS2O95864 444 aaKnown RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 IGSF6O95976 241 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 NTRK1P04629 796 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 HIST1H2AGP0C0S8 130 aaPredicted RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 HIST1H2ADP20671 130 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 AOAHP28039 575 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 MAPK1P28482 360 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 SERPINA4P29622 427 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 CD40LGP29965 261 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 ST13P50502 369 aaKnown RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 LMAN2Q12907 356 aa15.99■□□□□ 0.15
LIG1-206ENST00000594067 BOP1Q14137 746 aaKnown RBP15.99■□□□□ 0.15
LIG1-206ENST00000594067 KDM4DQ6B0I6 523 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms