RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 NPY2RP49146 381 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 Q0VFX4 171 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 TRIP13Q15645 432 aaPredicted RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 FRMPD2BQ6IN97 320 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 PRMT9Q6P2P2 845 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 CNSTQ6PJW8 725 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 OTOAQ7RTW8 1153 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 CAND1Q86VP6 1230 aaKnown RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 KBTBD2Q8IY47 623 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 OTUD6BQ8N6M0 293 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 OR2L3Q8NG85 312 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 OR1N1Q8NGS0 311 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 C8orf44Q96CB5 159 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 CABS1Q96KC9 395 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 FOPNLQ96NB1 174 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 ZNF285Q96NJ3 590 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 MESP1Q9BRJ9 268 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 ZC3H7BQ9UGR2 993 aaKnown RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 TSR3Q9UJK0 312 aaKnown RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 ENTPD4Q9Y227 616 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 RUVBL2Q9Y230 463 aaKnown RBP14.06□□□□□ -0.16
PNKP-202ENST00000593706 FBN2P35556 2912 aa14.06□□□□□ -0.16
PNKP-202ENST00000593706 NSG1A0A0A6YYJ2 146 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 KRT87PA6NCN2 255 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 VSTM2BA6NLU5 285 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 AP3B1O00203 1094 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 KPNA5O15131 536 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 NRP2O60462 931 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 JRKO75564 520 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 USP1O94782 785 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 KLHL18O94889 574 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 MED26O95402 600 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 ZGLP1P0C6A0 271 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 MGAT1P26572 445 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 CCNFP41002 786 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 MAGEA3P43357 314 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 GPS1Q13098 491 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 NAA25Q14CX7 972 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 MUM1Q2TAK8 710 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 ARMC3Q5W041 872 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 CATSPER1Q8NEC5 780 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 MAGOHBQ96A72 148 aaKnown RBP14.05□□□□□ -0.16
PNKP-202ENST00000593706 MOCOSQ96EN8 888 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 MFSD3Q96ES6 412 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 LMF1Q96S06 567 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 YIPF2Q9BWQ6 316 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 P2RY12Q9H244 342 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 TRMT1Q9NXH9 659 aaKnown RBP14.05□□□□□ -0.16
PNKP-202ENST00000593706 PTGFRNQ9P2B2 879 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 SOX13Q9UN79 622 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 NFS1Q9Y697 457 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 PDZD2O15018 2839 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 GTF3C1Q12789 2109 aa14.05□□□□□ -0.16
PNKP-202ENST00000593706 CD3EAPO15446 510 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 PRPF4O43172 522 aaKnown RBP eCLIP14.04□□□□□ -0.166e-7■■■■□ 23.2
PNKP-202ENST00000593706 PRICKLE3O43900 615 aaPredicted RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 KIF5CO60282 957 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 PHF2O75151 1096 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 AVILO75366 819 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 C1orf105O95561 183 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 KRT14P02533 472 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 STSP08842 583 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 CXCR2P25025 360 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 FNTAP49354 379 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 VPS41P49754 854 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 EIF3BP55884 814 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 EEF1A2Q05639 463 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 INAQ16352 499 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 CCSMST1Q4G0I0 132 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 RPUSD3Q6P087 351 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 CCDC137Q6PK04 289 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 RNF44Q7L0R7 432 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 AGGF1Q8N302 714 aaeCLIP14.04□□□□□ -0.16
PNKP-202ENST00000593706 MPP5Q8N3R9 675 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 SIRT6Q8N6T7 355 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 MAGEC3Q8TD91 643 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 BRIX1Q8TDN6 353 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 NAP1L3Q99457 506 aaPredicted RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 ZFYVE21Q9BQ24 234 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 TRIM56Q9BRZ2 755 aaKnown RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 ACAT2Q9BWD1 397 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 ENAMQ9NRM1 1142 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 BFARQ9NZS9 450 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 STOX2Q9P2F5 926 aaPredicted RBP14.04□□□□□ -0.16
PNKP-202ENST00000593706 CDC14AQ9UNH5 594 aa14.04□□□□□ -0.16
PNKP-202ENST00000593706 LOC105369274A0A096LPK9 316 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 TRAV17A0A0B4J275 112 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 LOC102723532A0A0G2JNH3 316 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 FANCGO15287 622 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 VPS26AO75436 327 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 NDUFS3O75489 264 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 PRR35P0CG20 571 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 COX6A1P12074 109 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 MLNP12872 115 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 FDXRP22570 491 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 CMPK1P30085 196 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 KCNK10P57789 538 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 TSTA3Q13630 321 aaPredicted RBP14.03□□□□□ -0.16
PNKP-202ENST00000593706 TYSND1Q2T9J0 566 aa14.03□□□□□ -0.16
PNKP-202ENST00000593706 VWA2Q5GFL6 755 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms