RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 LPGAT1Q92604 370 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 FAM136AQ96C01 138 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 MFSD3Q96ES6 412 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 MVB12AQ96EY5 273 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 BIRC8Q96P09 236 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 SLX1AQ9BQ83 275 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 FAM114A2Q9NRY5 505 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 C14orf105Q9NVL8 296 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 UTP6Q9NYH9 597 aaKnown RBP21.58■■□□□ 1.05
SSBP4-203ENST00000593641 PTGFRNQ9P2B2 879 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 STOX2Q9P2F5 926 aaPredicted RBP21.58■■□□□ 1.05
SSBP4-203ENST00000593641 GUCA1BQ9UMX6 200 aa21.58■■□□□ 1.05
SSBP4-203ENST00000593641 CPAMD8Q8IZJ3 1885 aa21.58■■□□□ 1.04
SSBP4-203ENST00000593641 H0YGG7 62 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 NIPSNAP2O75323 286 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 MATN4O95460 622 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 ESR1P03372 595 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 COX6A1P12074 109 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 CHRM3P20309 590 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 MGAT1P26572 445 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 EMP2P54851 167 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 ARF3P61204 181 aaPredicted RBP21.57■■□□□ 1.04
SSBP4-203ENST00000593641 DSG2Q14126 1118 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 RPS6KA1Q15418 735 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 TYSND1Q2T9J0 566 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 PRTGQ2VWP7 1150 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 TICAM1Q8IUC6 712 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 CSNK1A1LQ8N752 337 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 SMPDL3AQ92484 453 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 PLCD4Q9BRC7 762 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 KIFC1Q9BW19 673 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 SYBUQ9NX95 663 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 TRPC4Q9UBN4 977 aa21.57■■□□□ 1.04
SSBP4-203ENST00000593641 A0A1B0GUH1 482 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 IDSB3KWA1 339 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 GOLGA8KD6RF30 607 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 E5RI56 91 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 GOLGA8TH3BQL2 631 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 CCNDBP1O95273 360 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 ANXA5P08758 320 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 PRR35P0CG20 571 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 ERGP11308 486 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 ARNTP27540 789 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 YBX1P67809 324 aaKnown RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 ARHGAP19Q14CB8 494 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 ZRSR2Q15696 482 aaKnown RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 FBXO42Q6P3S6 717 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 DRICH1Q6PGQ1 229 aaPredicted RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 SUSD1Q6UWL2 747 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 CES3Q6UWW8 571 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 LAPTM4BQ86VI4 370 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 BRIX1Q8TDN6 353 aaKnown RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 RERGQ96A58 199 aaPredicted RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 TCF12Q99081 682 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 TRIM56Q9BRZ2 755 aaKnown RBP21.56■■□□□ 1.04
SSBP4-203ENST00000593641 RIC8BQ9NVN3 520 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 CRYL1Q9Y2S2 319 aa21.56■■□□□ 1.04
SSBP4-203ENST00000593641 SCN2AQ99250 2005 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 TRAV17A0A0B4J275 112 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 ZNF839A8K0R7 811 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 ARHGEF33A8MVX0 844 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 MYO1CO00159 1063 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 PCDH17O14917 1159 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 ZG16O60844 167 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 JRKO75564 520 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 CATP04040 527 aaKnown RBP21.55■■□□□ 1.04
SSBP4-203ENST00000593641 SERPINA7P05543 415 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 HEXBP07686 556 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 PKMP14618 531 aaKnown RBP21.55■■□□□ 1.04
SSBP4-203ENST00000593641 ADARP55265 1226 aaKnown RBP21.55■■□□□ 1.04
SSBP4-203ENST00000593641 EEF1A2Q05639 463 aaKnown RBP21.55■■□□□ 1.04
SSBP4-203ENST00000593641 GBX1Q14549 363 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 INAQ16352 499 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 GARNL3Q5VVW2 1013 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 C1QL3Q5VWW1 255 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 LRRC8BQ6P9F7 803 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 MMABQ96EY8 250 aaPredicted RBP21.55■■□□□ 1.04
SSBP4-203ENST00000593641 SOX13Q9UN79 622 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 RUVBL1Q9Y265 456 aaKnown RBP21.55■■□□□ 1.04
SSBP4-203ENST00000593641 ZKSCAN5Q9Y2L8 839 aa21.55■■□□□ 1.04
SSBP4-203ENST00000593641 STSP08842 583 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 OGNP20774 298 aaKnown RBP21.54■■□□□ 1.04
SSBP4-203ENST00000593641 SOX11P35716 441 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 HSD17B2P37059 387 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 CDK16Q00536 496 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 SIX1Q15475 284 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-203ENST00000593641 HKDC1Q2TB90 917 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 KLHL38Q2WGJ6 581 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 ACSBG2Q5FVE4 666 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 FJX1Q86VR8 437 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 PAQR7Q86WK9 346 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 SIRT6Q8N6T7 355 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 SPC24Q8NBT2 197 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 MAIP1Q8WWC4 291 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 MKKSQ9NPJ1 570 aaPredicted RBP21.54■■□□□ 1.04
SSBP4-203ENST00000593641 TAC3Q9UHF0 121 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 VPS9D1Q9Y2B5 631 aa21.54■■□□□ 1.04
SSBP4-203ENST00000593641 MRPS2Q9Y399 296 aaKnown RBP21.54■■□□□ 1.04
SSBP4-203ENST00000593641 IGHV1-45A0A0A0MS14 117 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms