RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 UGT2B28Q9BY64 529 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 CARS2Q9HA77 564 aaKnown RBP19.06■□□□□ 0.64
CLIP3-206ENST00000593074 NTN4Q9HB63 628 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 PRSS16Q9NQE7 514 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 CIDEBQ9UHD4 219 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 RUVBL1Q9Y265 456 aaKnown RBP19.06■□□□□ 0.64
CLIP3-206ENST00000593074 CDH23Q9H251 3354 aa19.06■□□□□ 0.64
CLIP3-206ENST00000593074 H3BNH8 94 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 UPK1AO00322 258 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 CXCR6O00574 342 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 DEAF1O75398 565 aaPredicted RBP19.05■□□□□ 0.64
CLIP3-206ENST00000593074 KAT7O95251 611 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 B3GALT4O96024 378 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 EPHX1P07099 455 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 RETP07949 1114 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 PEX19P40855 299 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 CDKN2CP42773 168 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 KIR3DL1P43629 444 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 GPR1P46091 355 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 RPS9P46781 194 aaKnown RBP19.05■□□□□ 0.64
CLIP3-206ENST00000593074 CHRNB3Q05901 458 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 PGS1Q32NB8 556 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 ATAT1Q5SQI0 421 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 GCNT7Q6ZNI0 430 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 PHACTR4Q8IZ21 702 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 METTL25Q8N6Q8 603 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 FAM86B1Q8N7N1 296 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 FAM47BQ8NA70 645 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 AURKBQ96GD4 344 aaPredicted RBP19.05■□□□□ 0.64
CLIP3-206ENST00000593074 VPS50Q96JG6 964 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 ZNF514Q96K75 400 aaPredicted RBP19.05■□□□□ 0.64
CLIP3-206ENST00000593074 MTERF1Q99551 399 aaKnown RBP19.05■□□□□ 0.64
CLIP3-206ENST00000593074 EBPLQ9BY08 206 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 SMPD3Q9NY59 655 aaPredicted RBP19.05■□□□□ 0.64
CLIP3-206ENST00000593074 ADGRE2Q9UHX3 823 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 PCDHGA11Q9Y5H2 935 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 A0A1B0GTW7 788 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 LRATO95237 230 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 GNAO1P09471 354 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 ATP6V1B1P15313 513 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 HYAL1Q12794 435 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 ANKRD46Q86W74 232 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 SYT12Q8IV01 421 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 ZNF480Q8WV37 535 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 NCSTNQ92542 709 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 MYADMQ96S97 322 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 TBCDQ9BTW9 1192 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 TRIM39Q9HCM9 518 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 MYRFQ9Y2G1 1151 aa19.05■□□□□ 0.64
CLIP3-206ENST00000593074 TRANK1O15050 2925 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ZNF23P17027 643 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 EIF2DP41214 584 aaKnown RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 SRSF11Q05519 484 aaKnown RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 UGT8Q16880 541 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 OR4F3Q6IEY1 312 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ZNF547Q8IVP9 402 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 CFAP206Q8IYR0 622 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 C10orf111Q8N326 155 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 NELL1Q92832 810 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 RMND5BQ96G75 393 aaPredicted RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 KXD1Q9BQD3 176 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 HDAC8Q9BY41 377 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 SGK2Q9HBY8 427 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 CD320Q9NPF0 282 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ZDHHC4Q9NPG8 344 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ATXN10Q9UBB4 475 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 C17orf113A0A1B0GUU1 675 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 RFXANKO14593 260 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 AHCYL1O43865 530 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 TBPL1P62380 186 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ACSM2AQ08AH3 577 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 DDX39BQ13838 428 aaKnown RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ADRM1Q16186 407 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 NKG7Q16617 165 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 NADK2Q4G0N4 442 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ACSM2BQ68CK6 577 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ENPP6Q6UWR7 440 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 SLCO4C1Q6ZQN7 724 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 NUDT18Q6ZVK8 323 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 TSPAN14Q8NG11 270 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 OR7G3Q8NG95 312 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 NEIL2Q969S2 332 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 GFM2Q969S9 779 aaKnown RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 RAB7BQ96AH8 199 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 FAM120BQ96EK7 910 aaKnown RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 REXO5Q96IC2 774 aaKnown RBP19.04■□□□□ 0.64
CLIP3-206ENST00000593074 LIMD1Q9UGP4 676 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 HCN2Q9UL51 889 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 KCNE2Q9Y6J6 123 aa19.04■□□□□ 0.64
CLIP3-206ENST00000593074 ANTXRLA6NF34 631 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 GSNP06396 782 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 TRPC1P48995 793 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 PNLIPRP1P54315 467 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 NR1H2P55055 460 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 ABHD18Q0P651 414 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 GTF2H3Q13889 308 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 FAM46CQ5VWP2 391 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 OR8J2Q8NGG1 315 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 FBXO30Q8TB52 745 aa19.03■□□□□ 0.64
CLIP3-206ENST00000593074 CXorf40AQ8TE69 158 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms