RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PLA2G2AP14555 144 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 SSTR1P30872 391 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 RELAQ04206 551 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 SLC9A5Q14940 896 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 PHKG1Q16816 387 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 FAM214AQ32MH5 1076 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 CAPN12Q6ZSI9 719 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 PDLIM5Q96HC4 596 aaKnown RBP26.04■■□□□ 1.76
SMAD4-213ENST00000591914 CCDC177Q9NQR7 707 aaPredicted RBP26.04■■□□□ 1.76
SMAD4-213ENST00000591914 SMYD2Q9NRG4 433 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 UTP6Q9NYH9 597 aaKnown RBP26.04■■□□□ 1.76
SMAD4-213ENST00000591914 NDOR1Q9UHB4 597 aa26.04■■□□□ 1.76
SMAD4-213ENST00000591914 MKRN2OSH3BPM6 223 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 CNOT3O75175 753 aaKnown RBP26.03■■□□□ 1.76
SMAD4-213ENST00000591914 EZRP15311 586 aaKnown RBP26.03■■□□□ 1.76
SMAD4-213ENST00000591914 PLTPP55058 493 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 TBPL1P62380 186 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 TRADDQ15628 312 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 THEMIS2Q5TEJ8 643 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 ZDHHC24Q6UX98 284 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 MBOAT1Q6ZNC8 495 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 FBXO25Q8TCJ0 367 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 FKBP10Q96AY3 582 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 TRIM55Q9BYV6 548 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 SYNPO2LQ9H987 977 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 ABCF3Q9NUQ8 709 aa26.03■■□□□ 1.76
SMAD4-213ENST00000591914 HELZ2Q9BYK8 2649 aaKnown RBP26.02■■□□□ 1.76
SMAD4-213ENST00000591914 FAM95CA0A1B0GW59 222 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 HYKKA2RU49 373 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 H0YGG7 62 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 ZNF37AP17032 561 aaPredicted RBP26.02■■□□□ 1.76
SMAD4-213ENST00000591914 ARF3P61204 181 aaPredicted RBP26.02■■□□□ 1.76
SMAD4-213ENST00000591914 PRTGQ2VWP7 1150 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 CPZQ66K79 652 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 AGTRAPQ6RW13 159 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 TMEM207Q6UWW9 146 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 CYS1Q717R9 158 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 OR2Y1Q8NGV0 311 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 RHOJQ9H4E5 214 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 CUEDC1Q9NWM3 386 aaPredicted RBP26.02■■□□□ 1.76
SMAD4-213ENST00000591914 TLK1Q9UKI8 766 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 PTRH2Q9Y3E5 179 aaKnown RBP26.02■■□□□ 1.76
SMAD4-213ENST00000591914 BAHCC1Q9P281 2608 aa26.02■■□□□ 1.76
SMAD4-213ENST00000591914 ARGFXA6NJG6 315 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 PIAS1O75925 651 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 DNAJB5O75953 348 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 URI1O94763 535 aaPredicted RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 MED26O95402 600 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 EIF2S1P05198 315 aaKnown RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 HIST1H2AGP0C0S8 130 aaPredicted RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 PIM1P11309 404 aaPredicted RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 HIST1H2ADP20671 130 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 FOLR3P41439 243 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 ILF2Q12905 390 aaKnown RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 SSPNQ14714 243 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 PRAMEF13Q5VWM6 474 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 OVCH1Q7RTY7 1134 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 RAB43Q86YS6 212 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 HIST1H2AHQ96KK5 128 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 OR2A5Q96R48 311 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 HIST1H2AJQ99878 128 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 H2AFJQ9BTM1 129 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 PCBD2Q9H0N5 130 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 ING2Q9H160 280 aa26.01■■□□□ 1.75
SMAD4-213ENST00000591914 ZNF71Q9NQZ8 489 aaPredicted RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 HEMK1Q9Y5R4 338 aaPredicted RBP26.01■■□□□ 1.75
SMAD4-213ENST00000591914 CCDC88CQ9P219 2028 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 PCSK5Q92824 1860 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 TCRBV9S1A1TA0A576 114 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 CXorf49A8MYA2 514 aaPredicted RBP26■■□□□ 1.75
SMAD4-213ENST00000591914 ALBP02768 609 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 GSTA2P09210 222 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 ATXN8OSP0DMR3 200 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 HRH2P25021 359 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 EMP3P54852 163 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 AP1S2P56377 157 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 TAS2R39P59534 338 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 WHAMMP3Q1A5X7 153 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 LACTB2Q53H82 288 aaPredicted RBP26■■□□□ 1.75
SMAD4-213ENST00000591914 TCTN3Q6NUS6 607 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 COX15Q7KZN9 410 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 ZDHHC19Q8WVZ1 309 aaPredicted RBP26■■□□□ 1.75
SMAD4-213ENST00000591914 VPS39Q96JC1 886 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 C10orf90Q96M02 699 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 SGPP1Q9BX95 441 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 ATG10Q9H0Y0 220 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 SLC26A1Q9H2B4 701 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 WDR54Q9H977 334 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 TP53TG5Q9Y2B4 290 aa26■■□□□ 1.75
SMAD4-213ENST00000591914 MDC1Q14676 2089 aaKnown RBP25.99■■□□□ 1.75
SMAD4-213ENST00000591914 HAT1O14929 419 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 SUV39H1O43463 412 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 C1QAP02745 245 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ENO2P09104 434 aaPredicted RBP25.99■■□□□ 1.75
SMAD4-213ENST00000591914 SAT1P21673 171 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 CCND1P24385 295 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 GPX6P59796 221 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 CHAF1BQ13112 559 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ATP1A4Q13733 1029 aa25.99■■□□□ 1.75
SMAD4-213ENST00000591914 ZXDCQ2QGD7 858 aaPredicted RBP25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms