RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 GAD1Q99259 594 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 DDX50Q9BQ39 737 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 SRSF8Q9BRL6 282 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 SYT17Q9BSW7 474 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 PI4K2AQ9BTU6 479 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 GCOM2Q9BZD3 368 aaPredicted RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 SHCBP1LQ9BZQ2 653 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 C6orf62Q9GZU0 229 aaPredicted RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 WNT5BQ9H1J7 359 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CARD9Q9H257 536 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 RAD21L1Q9H4I0 556 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 LRRC19Q9H756 370 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 UCK1Q9HA47 277 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CRLF2Q9HC73 371 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 TUFT1Q9NNX1 390 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 LZTFL1Q9NQ48 299 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 DIABLOQ9NR28 239 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 KLHL1Q9NR64 748 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 SENP1Q9P0U3 644 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 KCNG2Q9UJ96 466 aa3.34□□□□□ -1.87
VMP1-212ENST00000591782 CHTOPQ9Y3Y2 248 aaKnown RBP3.34□□□□□ -1.87
VMP1-212ENST00000591782 KDM6BO15054 1643 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TRAV6A0A075B6T7 132 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 C15orf38-AP3S2A0A0A6YYH1 394 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 A0A1W2PP11 408 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 KRT87PA6NCN2 255 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ASPDHA6ND91 283 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ACOD1A6NK06 481 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ZNF879B4DU55 563 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 DDX39AO00148 427 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 VILLO15195 856 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 RAD51BO15315 384 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 MAGEB3O15480 346 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 OGG1O15527 345 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ACSL4O60488 711 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GPC4O75487 556 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ATP5HO75947 161 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 CSPG5O95196 566 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 POP4O95707 220 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 STARD3NLO95772 234 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 DNTTP04053 509 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 HIST1H2ABP04908 130 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 F7P08709 466 aaPredicted RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 GSTA2P09210 222 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 CTRB1P17538 263 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 PRKACAP17612 351 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 AMD1P17707 334 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ATF6P18850 670 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 POLR2CP19387 275 aaPredicted RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 HIST1H2ADP20671 130 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 DGKAP23743 735 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 HOXC8P31273 242 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 EVI2BP34910 448 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 SERPINB6P35237 376 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 KRT2P35908 639 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ETV5P41161 510 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TMED10P49755 219 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 RGS7P49802 495 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GPR143P51810 404 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 RAP1GDS1P52306 607 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 HADHBP55084 474 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 DLX5P56178 289 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 SLC26A5P58743 744 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ACY1Q03154 408 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GBE1Q04446 702 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TROAPQ12815 778 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 STK4Q13043 487 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GTF2H2Q13888 395 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 SCARB2Q14108 478 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ZNF234Q14588 700 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 NR1D2Q14995 579 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 PPA1Q15181 289 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ZMYND11Q15326 602 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 BCL2A1Q16548 175 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 XKR3Q5GH77 459 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 BEND6Q5SZJ8 279 aaPredicted RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 CTRB2Q6GPI1 263 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 GTF2H2CQ6P1K8 395 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 CASC4Q6P4E1 433 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 FAM173BQ6P4H8 233 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ZNF704Q6ZNC4 412 aaPredicted RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 FOXL2NBQ6ZUU3 175 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 C9orf139Q6ZV77 190 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ASB18Q6ZVZ8 466 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TRMT10CQ7L0Y3 403 aaKnown RBP3.33□□□□□ -1.88
VMP1-212ENST00000591782 HIST3H2AQ7L7L0 130 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 DSG4Q86SJ6 1040 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 SLC51BQ86UW2 128 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 DNAAF5Q86Y56 855 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 HACE1Q8IYU2 909 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ADGRF2Q8IZF7 708 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 NIPA2Q8N8Q9 360 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 AVL9Q8NBF6 648 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 SLC4A11Q8NBS3 891 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 ATAD1Q8NBU5 361 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 IPMKQ8NFU5 416 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 LILRB4Q8NHJ6 448 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 CFAP61Q8NHU2 1237 aa3.33□□□□□ -1.88
VMP1-212ENST00000591782 TEX47Q8TBZ9 253 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms