RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 PHF2O75151 1096 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 NDUFS3O75489 264 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 MCM3P25205 808 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 ITGA3P26006 1051 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 ARNTP27540 789 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 NMBRP28336 390 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 SESN2P58004 480 aaPredicted RBP9.94□□□□□ -0.82
VPS4B-207ENST00000591519 CDK16Q00536 496 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 GPS1Q13098 491 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 CCSMST1Q4G0I0 132 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 WASHC2DQ5SRD0 308 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 AGAP7PQ5VUJ5 663 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 PRMT9Q6P2P2 845 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 FBXO42Q6P3S6 717 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 SYT10Q6XYQ8 523 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 KLHL7Q8IXQ5 586 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 RAB42Q8N4Z0 105 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 OR2L3Q8NG85 312 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 GSDMBQ8TAX9 411 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 MAGEC3Q8TD91 643 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.94□□□□□ -0.82
VPS4B-207ENST00000591519 VPS50Q96JG6 964 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 AGAP4Q96P64 663 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 LMF1Q96S06 567 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 WDR77Q9BQA1 342 aaPredicted RBP9.94□□□□□ -0.82
VPS4B-207ENST00000591519 SELENOSQ9BQE4 189 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 KRTAP4-6Q9BYQ5 205 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 ILKAPQ9H0C8 392 aaPredicted RBP9.94□□□□□ -0.82
VPS4B-207ENST00000591519 DDX47Q9H0S4 455 aaKnown RBP9.94□□□□□ -0.82
VPS4B-207ENST00000591519 SPATA7Q9P0W8 599 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 ERRFI1Q9UJM3 462 aaPredicted RBP9.94□□□□□ -0.82
VPS4B-207ENST00000591519 CDC23Q9UJX2 597 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 FBXL4Q9UKA2 621 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 SLC5A6Q9Y289 635 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 NTNG1Q9Y2I2 539 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 NFS1Q9Y697 457 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 SAR1BQ9Y6B6 198 aa9.94□□□□□ -0.82
VPS4B-207ENST00000591519 IGLV3-12A0A075B6K2 115 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 TCRBV7S3A2A0A539 114 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 OR2A25A4D2G3 310 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 SLC35F4A4IF30 521 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 ANKUB1A6NFN9 424 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 H3BMM5 538 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 GOLGA8MH3BSY2 632 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 FANCGO15287 622 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 VAPBO95292 243 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 MED26O95402 600 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 ERGP11308 486 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 ATP5DP30049 168 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 CASQ1P31415 396 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 TSFMP43897 325 aaKnown RBP9.93□□□□□ -0.82
VPS4B-207ENST00000591519 OR1D4P47884 311 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 GLRBP48167 497 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 CARSP49589 748 aaKnown RBP9.93□□□□□ -0.82
VPS4B-207ENST00000591519 CRADDP78560 199 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 RELAQ04206 551 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 NAA25Q14CX7 972 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 TYSND1Q2T9J0 566 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 PRTGQ2VWP7 1150 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 CTSL3PQ5NE16 218 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 ATG9BQ674R7 924 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 MRNIPQ6NTE8 343 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 LRRC8BQ6P9F7 803 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 MAMDC2Q7Z304 686 aaPredicted RBP9.93□□□□□ -0.82
VPS4B-207ENST00000591519 SDCCAG8Q86SQ7 713 aaPredicted RBP9.93□□□□□ -0.82
VPS4B-207ENST00000591519 KCNMB4Q86W47 210 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 TTC29Q8NA56 475 aaPredicted RBP9.93□□□□□ -0.82
VPS4B-207ENST00000591519 OR11G2Q8NGC1 345 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 STT3BQ8TCJ2 826 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 LPGAT1Q92604 370 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 MFSD3Q96ES6 412 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 FOPNLQ96NB1 174 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 LHPPQ9H008 270 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 ZNF395Q9H8N7 513 aaPredicted RBP9.93□□□□□ -0.82
VPS4B-207ENST00000591519 ZNF304Q9HCX3 659 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 AGPAT4Q9NRZ5 378 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 CIDEBQ9UHD4 219 aa9.93□□□□□ -0.82
VPS4B-207ENST00000591519 CACNA1DQ01668 2161 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 LOC105369274A0A096LPK9 316 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 LOC102723532A0A0G2JNH3 316 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 A0A1W2PQ72 361 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 CES2O00748 559 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 HPP00738 406 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ESR1P03372 595 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ZGLP1P0C6A0 271 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 TPSB2P20231 275 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 VSX2P58304 361 aaPredicted RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 DHX9Q08211 1270 aaKnown RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 Q0VFX4 171 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ARHGAP19Q14CB8 494 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 PPP1R7Q15435 360 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 TPSAB1Q15661 275 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 CYP1B1Q16678 543 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 TUBB8Q3ZCM7 444 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 RNF187Q5TA31 235 aaPredicted RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 ANKRD22Q5VYY1 191 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 B3GNTL1Q67FW5 361 aaPredicted RBP9.92□□□□□ -0.82
VPS4B-207ENST00000591519 FRMPD2BQ6IN97 320 aa9.92□□□□□ -0.82
VPS4B-207ENST00000591519 RPUSD3Q6P087 351 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms