RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 ZIC1Q15915 447 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 FBXO48Q5FWF7 155 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 SH2D5Q6ZV89 423 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 GPSM1Q86YR5 675 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 OR2A1Q8NGT9 310 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 KLHL6Q8WZ60 621 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 SMPDL3AQ92484 453 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 FBXL8Q96CD0 374 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 HIST1H2AHQ96KK5 128 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 ZIM3Q96PE6 472 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 ATOH8Q96SQ7 321 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 CD180Q99467 661 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 HIST1H2AJQ99878 128 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 H2AFJQ9BTM1 129 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 TRIM54Q9BYV2 358 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 EPN3Q9H201 632 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 ZNF768Q9H5H4 540 aaKnown RBP20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 PPCSQ9HAB8 311 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 RNF112Q9ULX5 631 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 AHCTF1Q8WYP5 2266 aa20.66■□□□□ 0.9
R3HDM4-206ENST00000590454 STMND1H3BQB6 276 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 OAS2P29728 719 aaKnown RBP20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 HSD17B2P37059 387 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 ATP1A2P50993 1020 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 AP1S2P56377 157 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 TBPL1P62380 186 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 FOXK1P85037 733 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 KCNAB2Q13303 367 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 NAE1Q13564 534 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 SF1Q15637 639 aaKnown RBP20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 FAM83EQ2M2I3 478 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 FRA10AC1Q70Z53 315 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 CCDC91Q7Z6B0 441 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 ALKBH8Q96BT7 664 aaKnown RBP20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 PYCR2Q96C36 320 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 TRAPPC9Q96Q05 1148 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 MIPEPQ99797 713 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 C1GALT1Q9NS00 363 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 TUBD1Q9UJT1 453 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 SH2B3Q9UQQ2 575 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 PCM1Q15154 2024 aa20.65■□□□□ 0.9
R3HDM4-206ENST00000590454 COL12A1Q99715 3063 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 A0A0J9YY10 115 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 EFCAB7A8K855 629 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 UBXN8O00124 270 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 HGSO14964 777 aaPredicted RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 TOX3O15405 576 aaPredicted RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 TAPBPO15533 448 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 NRP2O60462 931 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 MT-ND3P03897 115 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 FGF3P11487 239 aaPredicted RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 NELFEP18615 380 aaKnown RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 KRT15P19012 456 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 CSTF2P33240 577 aaKnown RBP eCLIP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 POLE2P56282 527 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 SLC5A12Q1EHB4 618 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 AGBL5Q8NDL9 886 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 PMEPA1Q969W9 287 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 RHBDF1Q96CC6 855 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 SLC41A2Q96JW4 573 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 EGFL8Q99944 293 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 TMEM109Q9BVC6 243 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 ROPN1BQ9BZX4 212 aaPredicted RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 ROPN1Q9HAT0 212 aaPredicted RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 SIDT1Q9NXL6 827 aaKnown RBP20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 TAC3Q9UHF0 121 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 LGALS13Q9UHV8 139 aa20.64■□□□□ 0.89
R3HDM4-206ENST00000590454 KERAO60938 352 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 EBLN1P0CF75 366 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 MTHFD2P13995 350 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 FOLR1P15328 257 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 MAGP20916 626 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 RPA3P35244 121 aaPredicted RBP20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 CASRP41180 1078 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 CDKL1Q00532 357 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 ACAP2Q15057 778 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 TECRLQ5HYJ1 363 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 FAM129CQ86XR2 697 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 BMPERQ8N8U9 685 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 OR2L3Q8NG85 312 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 OR56A3Q8NH54 315 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 STAG3L4Q8TBR4 150 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 ESAMQ96AP7 390 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 TMEM79Q9BSE2 394 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 SGPP1Q9BX95 441 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 FAM60AQ9NP50 221 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 SLC6A20Q9NP91 592 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 INTS7Q9NVH2 962 aaKnown RBP20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 CD274Q9NZQ7 290 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 ANAPC2Q9UJX6 822 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 DOPEY2Q9Y3R5 2298 aa20.63■□□□□ 0.89
R3HDM4-206ENST00000590454 IGKV1-8A0A0C4DH67 115 aa20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 CLEC18AA5D8T8 446 aa20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 PABPN1LA6NDY0 278 aaKnown RBP20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 ZNF839A8K0R7 811 aa20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 HCRTR1O43613 425 aa20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 ZBTB11O95625 1053 aaPredicted RBP20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 ANXA5P08758 320 aa20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 SBK3P0C264 359 aa20.62■□□□□ 0.89
R3HDM4-206ENST00000590454 COL6A2P12110 1019 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms