RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 HKDC1Q2TB90 917 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.06□□□□□ -0.32
HDAC5-208ENST00000588419 MFSD4BQ5TF39 518 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 C1QL3Q5VWW1 255 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 B3GNTL1Q67FW5 361 aaPredicted RBP13.06□□□□□ -0.32
HDAC5-208ENST00000588419 PRMT9Q6P2P2 845 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 CASC4Q6P4E1 433 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 IGFL2Q6UWQ7 119 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 KBTBD2Q8IY47 623 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 CSNK1A1LQ8N752 337 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 OR9A1PQ8NGU1 263 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 COG1Q8WTW3 980 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 FAR1Q8WVX9 515 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 TAC3Q9UHF0 121 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 PCYOX1Q9UHG3 505 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 RUVBL1Q9Y265 456 aaKnown RBP13.06□□□□□ -0.32
HDAC5-208ENST00000588419 DOPEY1Q5JWR5 2465 aa13.06□□□□□ -0.32
HDAC5-208ENST00000588419 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 OR2A25A4D2G3 310 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 ENO4A6NNW6 628 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 ARHGEF33A8MVX0 844 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 IDSB3KWA1 339 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 PRPF4O43172 522 aaKnown RBP eCLIP13.05□□□□□ -0.323e-6■■■■□ 19.9
HDAC5-208ENST00000588419 ONECUT2O95948 504 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 COX6A1P12074 109 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 ARNTP27540 789 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 NPY2RP49146 381 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 EMP2P54851 167 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 KCNK10P57789 538 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 SRSF11Q05519 484 aaKnown RBP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 NAA25Q14CX7 972 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 SYT16Q17RD7 645 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 KLHL38Q2WGJ6 581 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 ANKRD20A4Q4UJ75 823 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 ACSBG2Q5FVE4 666 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 RNF187Q5TA31 235 aaPredicted RBP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 THEMIS2Q5TEJ8 643 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 LAPTM4BQ86VI4 370 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 SPNS2Q8IVW8 549 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 SRRM1Q8IYB3 904 aaKnown RBP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 RNF10Q8N5U6 811 aaKnown RBP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 BCORP1Q8N888 145 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 HMGCLL1Q8TB92 370 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 SMPDL3AQ92484 453 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 LPGAT1Q92604 370 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 RERGQ96A58 199 aaPredicted RBP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 BIRC8Q96P09 236 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 BARD1Q99728 777 aaKnown RBP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC5-208ENST00000588419 GALPQ9UBC7 116 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 NOTCH2Q04721 2471 aa13.05□□□□□ -0.32
HDAC5-208ENST00000588419 A0A0A6YYC8 382 aaPredicted RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 TCRBV7S3A2A0A539 114 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 H3BMM5 538 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 I3L1I5 382 aaPredicted RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 AP3B1O00203 1094 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 JRKO75564 520 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 WFS1O76024 890 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 USP1O94782 785 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 CCNDBP1O95273 360 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 FGGP02679 453 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 CATP04040 527 aaKnown RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 PRR35P0CG20 571 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 MAT1AQ00266 395 aaKnown RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 CUL1Q13616 776 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 KCNJ11Q14654 390 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 NAA30Q147X3 362 aaPredicted RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 SIX1Q15475 284 aaPredicted RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 CCNG2Q16589 344 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 TYSND1Q2T9J0 566 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 MEI1Q5TIA1 1274 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 NDUFAF7Q7L592 441 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 PLD3Q8IV08 490 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 ZNF669Q96BR6 464 aaPredicted RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 PKP4Q99569 1192 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 PLCD4Q9BRC7 762 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 TRIM56Q9BRZ2 755 aaKnown RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 SYNPO2LQ9H987 977 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 FAM114A2Q9NRY5 505 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 SH3BGRL2Q9UJC5 107 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 SOX13Q9UN79 622 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 CDC14AQ9UNH5 594 aa13.04□□□□□ -0.32
HDAC5-208ENST00000588419 DRG1Q9Y295 367 aaKnown RBP13.04□□□□□ -0.32
HDAC5-208ENST00000588419 POLEQ07864 2286 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 CTAGE9A4FU28 777 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 PRSS44E7EML9 344 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 SMAPO00193 183 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 HAT1O14929 419 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 P2RX6O15547 441 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 AVILO75366 819 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 ESR1P03372 595 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 PAMP19021 973 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 OGNP20774 298 aaKnown RBP13.03□□□□□ -0.32
HDAC5-208ENST00000588419 PNLIPRP1P54315 467 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 DSG2Q14126 1118 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 PRTGQ2VWP7 1150 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 ICE2Q659A1 982 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 ZNF470Q6ECI4 717 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms