RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 OPTCQ9UBM4 332 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 RARRES3Q9UL19 164 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 PLCL2Q9UPR0 1127 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 SATB2Q9UPW6 733 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 PLLPQ9Y342 182 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 ANGPTL3Q9Y5C1 460 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 PCDHGA7Q9Y5G6 932 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 AP1M2Q9Y6Q5 423 aa8.72□□□□□ -1.01
CIRBP-218ENST00000588344 KCNE1BA0A087WTH5 132 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 OR2A25A4D2G3 310 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 KRT87PA6NCN2 255 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TRABD2BA6NFA1 517 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 H3BQF6 201 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 CASC3O15234 703 aaKnown RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TM9SF1O15321 606 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TAPBPO15533 448 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ATP8B1O43520 1251 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 CCNT2O60583 730 aaKnown RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 UGDHO60701 494 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TNFSF15O95150 251 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 HBQ1P09105 142 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 C1GALT1C1LP0DN25 315 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 MYL2P10916 166 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 FGF3P11487 239 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 FGF5P12034 268 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 FOLR1P15328 257 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 EPB42P16452 691 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 IMPDH1P20839 514 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 MAGP20916 626 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 HPDP32754 393 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 CASP2P42575 452 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 HSPA7P48741 367 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 SLC18A1P54219 525 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 PRKAA2P54646 552 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 EMP3P54852 163 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 RPS15AP62244 130 aaKnown RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 GABREP78334 506 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 FOXM1Q08050 763 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TUBB3Q13509 450 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TBCCQ15814 346 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 PDK4Q16654 411 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 HIST2H2ACQ16777 129 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 PAGE2BQ5JRK9 111 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 YOD1Q5VVQ6 348 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ATG9BQ674R7 924 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 HIST2H2AA3Q6FI13 130 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF425Q6IV72 752 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 FBXO42Q6P3S6 717 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TLDC1Q6P9B6 456 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 NXPE4Q6UWF7 544 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 EXOC3L1Q86VI1 746 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TAX1BP1Q86VP1 789 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 MCATQ8IVS2 390 aaKnown RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 SPNS2Q8IVW8 549 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 C4orf33Q8N1A6 199 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 KRT78Q8N1N4 520 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 DNAJC22Q8N4W6 341 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF655Q8N720 491 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 BMPERQ8N8U9 685 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 TTLQ8NG68 377 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 EXT2Q93063 718 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 UBE2E3Q969T4 207 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 RERGQ96A58 199 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 PYCR2Q96C36 320 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 APOPT1Q96IL0 206 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF578Q96N58 590 aaPredicted RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 OR4K3Q96R72 315 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 OR6C1Q96RD1 312 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 NRTNQ99748 197 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ZFYVE21Q9BQ24 234 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 AIF1LQ9BQI0 150 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 SARGQ9BW04 601 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 C1QTNF3Q9BXJ4 246 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 NLNQ9BYT8 704 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 NT5DC2Q9H857 520 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 PELI2Q9HAT8 420 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ZNF358Q9NW07 568 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 SIDT1Q9NXL6 827 aaKnown RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 CPSF2Q9P2I0 782 aaKnown RBP8.71□□□□□ -1.02
CIRBP-218ENST00000588344 DKK4Q9UBT3 224 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 KLK13Q9UKR3 277 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 STK38LQ9Y2H1 464 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 AK5Q9Y6K8 562 aa8.71□□□□□ -1.02
CIRBP-218ENST00000588344 ARHGEF17Q96PE2 2063 aaPredicted RBP8.7□□□□□ -1.02
CIRBP-218ENST00000588344 UQCRHLA0A096LP55 91 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 E7EQ34 232 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 H7BY64 318 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 TK2O00142 265 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PRPF4O43172 522 aaKnown RBP eCLIP8.7□□□□□ -1.024e-9■■□□□ 12.1
CIRBP-218ENST00000588344 PLIN3O60664 434 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 ZWINTO95229 277 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 MLYCDO95822 493 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PROCP04070 461 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 UQCRHP07919 91 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 CCL4P13236 92 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 CPA3P15088 417 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PVRP15151 417 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 PSMB5P28074 263 aa8.7□□□□□ -1.02
CIRBP-218ENST00000588344 SERPINB1P30740 379 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms