RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 NDUFA5Q16718 116 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 TBC1D25Q3MII6 688 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 LYPLAL1Q5VWZ2 237 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF433Q8N7K0 673 aaPredicted RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 RAB8BQ92930 207 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SLC35A5Q9BS91 424 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 ARMC1Q9NVT9 282 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 CNOT11Q9UKZ1 510 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 A0A1B0GUL6 1792 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 AP3D1O14617 1153 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 PGRMC2O15173 223 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 DNTTP04053 509 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SCAPQ12770 1279 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SREBF2Q12772 1141 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 MED27Q6P2C8 311 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 RNF111Q6ZNA4 994 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 BEND7Q8N7W2 519 aaPredicted RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SCAMP4Q969E2 229 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 TEFMQ96QE5 360 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 KIAA1522Q9P206 1035 aaPredicted RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 TMX2-CTNND1H3BSU7 103 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SLC30A4O14863 429 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 TIE1P35590 1138 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 GATMP50440 423 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 PURAQ00577 322 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SF1Q15637 639 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 KIAA1161Q6NSJ0 714 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 MZT2AQ6P582 158 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SH2D5Q6ZV89 423 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 HOMEZQ8IX15 550 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 NFKBIDQ8NI38 313 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 RPL3LQ92901 407 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF382Q96SR6 550 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 AGPAT4Q9NRZ5 378 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 COL14A1Q05707 1796 aaKnown RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 MANSC4A6NHS7 340 aaPredicted RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 NOS1APO75052 506 aaPredicted RBP17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 GPR32O75388 356 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 WASP42768 502 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 ATP4BP51164 291 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 SCARB2Q14108 478 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 ZNF792Q3KQV3 632 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 AQP11Q8NBQ7 271 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 NETO1Q8TDF5 533 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 KCNJ9Q92806 393 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 GJD2Q9UKL4 321 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 PCDHGA11Q9Y5H2 935 aa17.4■□□□□ 0.38
ATPAF1-214ENST00000576409 N4BP2Q86UW6 1770 aaPredicted RBP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 TRBC2A0A5B9 178 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 TLX2O43763 284 aaPredicted RBP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 CDRT1O95170 752 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 THOC7Q6I9Y2 204 aaKnown RBP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 SERPINA13PQ6UXR4 307 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 C17orf64Q86WR6 236 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 FAM20CQ8IXL6 584 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 BEX1Q9HBH7 125 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 RPS6KB2Q9UBS0 482 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 CFL2Q9Y281 166 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 STX16O14662 325 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 ANXA8P13928 327 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 CSTF2P33240 577 aaKnown RBP eCLIP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 KDELR2P33947 212 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 RYKP34925 604 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 DCTP40126 519 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 PREPP48147 710 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 DSG4Q86SJ6 1040 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 GALNT12Q8IXK2 581 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 SPARTQ8N0X7 666 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 AP3S1Q92572 193 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 SLC9A6Q92581 669 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 PIGKQ92643 395 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 TTYH2Q9BSA4 534 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 OR51V1Q9H2C8 321 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 TMEM138Q9NPI0 162 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 TMEM248Q9NWD8 314 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 MAT2BQ9NZL9 334 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 GULP1Q9UBP9 304 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 TRAV19A0A0A6YYK7 116 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 IQCMA0A1B0GVH7 501 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 A0A1W2PRB8 838 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 EEDO75530 441 aaKnown RBP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 FDXRP22570 491 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 SELPLGQ14242 412 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 SUSD1Q6UWL2 747 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 ZNF517Q6ZMY9 492 aaPredicted RBP17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 PAQR9Q6ZVX9 377 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 ZFAND4Q86XD8 727 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 ARHGAP12Q8IWW6 846 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 CLECL1Q8IZS7 167 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 UMODL1-AS1Q8N2C9 162 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 RHEBL1Q8TAI7 183 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 ING4Q9UNL4 249 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 ZNF232Q9UNY5 417 aa17.39■□□□□ 0.37
ATPAF1-214ENST00000576409 STX11O75558 287 aa17.38■□□□□ 0.37
ATPAF1-214ENST00000576409 KLK1P06870 262 aa17.38■□□□□ 0.37
ATPAF1-214ENST00000576409 AP1S1P61966 158 aa17.38■□□□□ 0.37
ATPAF1-214ENST00000576409 UPP1Q16831 310 aa17.38■□□□□ 0.37
ATPAF1-214ENST00000576409 PKDCCQ504Y2 493 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms