RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 STOX2Q9P2F5 926 aaPredicted RBP16.54■□□□□ 0.24
SMG6-212ENST00000573153 ANKMY1Q9P2S6 941 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 ADAMTS6Q9UKP5 1117 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 CORO1CQ9ULV4 474 aaPredicted RBP16.54■□□□□ 0.24
SMG6-212ENST00000573153 PLAAQ9Y263 795 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 PADI2Q9Y2J8 665 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.54■□□□□ 0.24
SMG6-212ENST00000573153 SHANK1Q9Y566 2161 aa16.54■□□□□ 0.24
SMG6-212ENST00000573153 MDC1Q14676 2089 aaKnown RBP16.54■□□□□ 0.24
SMG6-212ENST00000573153 A0A0J9YVX5 310 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 SOCS6O14544 535 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 SRPX2O60687 465 aaPredicted RBP16.53■□□□□ 0.24
SMG6-212ENST00000573153 AHSGP02765 367 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 OTX2P32243 289 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 FOLR3P41439 243 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 ELK3P41970 407 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 EFNA3P52797 238 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 ARSFP54793 590 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 MLLT10P55197 1068 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 CDKN2DP55273 166 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 ARL4CP56559 192 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 SOX8P57073 446 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 VSX2P58304 361 aaPredicted RBP16.53■□□□□ 0.24
SMG6-212ENST00000573153 GRM7Q14831 915 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 ICE2Q659A1 982 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 RAB43Q86YS6 212 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 SHISA5Q8N114 240 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 OR2A5Q96R48 311 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 WDR54Q9H977 334 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 CUEDC1Q9NWM3 386 aaPredicted RBP16.53■□□□□ 0.24
SMG6-212ENST00000573153 P4HTMQ9NXG6 502 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 ZC3H7BQ9UGR2 993 aaKnown RBP16.53■□□□□ 0.24
SMG6-212ENST00000573153 TAC3Q9UHF0 121 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 SH2B3Q9UQQ2 575 aa16.53■□□□□ 0.24
SMG6-212ENST00000573153 IGLV3-12A0A075B6K2 115 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 H0YGG7 62 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 P2RX6O15547 441 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 ALBP02768 609 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 OR1D4P47884 311 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 PGDP52209 483 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 ARF3P61204 181 aaPredicted RBP16.52■□□□□ 0.24
SMG6-212ENST00000573153 ETF1P62495 437 aaKnown RBP16.52■□□□□ 0.24
SMG6-212ENST00000573153 RELAQ04206 551 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 PRDX1Q06830 199 aaKnown RBP16.52■□□□□ 0.24
SMG6-212ENST00000573153 TEDDM1Q5T9Z0 273 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 METTL27Q8N6F8 245 aaPredicted RBP16.52■□□□□ 0.24
SMG6-212ENST00000573153 PTERQ96BW5 349 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 ZFYVE21Q9BQ24 234 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 ZNF552Q9H707 407 aaPredicted RBP16.52■□□□□ 0.24
SMG6-212ENST00000573153 TAS2R13Q9NYV9 303 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 TRMT6Q9UJA5 497 aaKnown RBP16.52■□□□□ 0.24
SMG6-212ENST00000573153 IKZF3Q9UKT9 509 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 PCDHGB7Q9Y5F8 929 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 HS3ST3B1Q9Y662 390 aa16.52■□□□□ 0.24
SMG6-212ENST00000573153 COL12A1Q99715 3063 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 FAM187AA6NFU0 413 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 EFCAB8A8MWE9 144 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 FOXS1O43638 330 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 ZBTB14O43829 449 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 ATXN8OSP0DMR3 200 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 ALAS2P22557 587 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 MMP11P24347 488 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 CMPK1P30085 196 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 RPL21P46778 160 aaKnown RBP16.51■□□□□ 0.23
SMG6-212ENST00000573153 PHKG1Q16816 387 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 MBOAT1Q6ZNC8 495 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 BBOF1Q8ND07 529 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 SPATA4Q8NEY3 305 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 IP6K3Q96PC2 410 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 KRT12Q99456 494 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 MCMBPQ9BTE3 642 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 NDOR1Q9UHB4 597 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 CHMP2BQ9UQN3 213 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 PDE10AQ9Y233 779 aa16.51■□□□□ 0.23
SMG6-212ENST00000573153 RUVBL1Q9Y265 456 aaKnown RBP16.51■□□□□ 0.23
SMG6-212ENST00000573153 MRPS2Q9Y399 296 aaKnown RBP16.51■□□□□ 0.23
SMG6-212ENST00000573153 PRRC2CQ9Y520 2896 aaKnown RBP16.51■□□□□ 0.23
SMG6-212ENST00000573153 PTPN13Q12923 2485 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 HYKKA2RU49 373 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 HAT1O14929 419 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 SLC16A5O15375 505 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 ALOX12BO75342 701 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 CCNDBP1O95273 360 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 C8GP07360 202 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 RPA3P35244 121 aaPredicted RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 CARSP49589 748 aaKnown RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 RGS4P49798 205 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 EMP3P54852 163 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 ABATP80404 500 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 SP140Q13342 867 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 FASTKD3Q14CZ7 662 aaKnown RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 HKDC1Q2TB90 917 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 PRR30Q53SZ7 412 aaPredicted RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 HP1BP3Q5SSJ5 553 aaPredicted RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 PAQR3Q6TCH7 311 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 KIRREL2Q6UWL6 708 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 ZNF572Q7Z3I7 529 aaPredicted RBP16.5■□□□□ 0.23
SMG6-212ENST00000573153 MAATS1Q7Z4T9 603 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 VN1R4Q7Z5H5 301 aa16.5■□□□□ 0.23
SMG6-212ENST00000573153 AMER3Q8N944 861 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms