RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 C17orf99Q6UX52 265 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 LYSMD2Q8IV50 215 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ZZZ3Q8IYH5 903 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 POC5Q8NA72 575 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 KCNC2Q96PR1 638 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 COPS4Q9BT78 406 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 GLYATL1P3A0A0U1RQE8 302 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 GLTPD2A6NH11 291 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 TBL1XO60907 577 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 CAMK2GQ13555 558 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SF1Q15637 639 aaKnown RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 TRIM71Q2Q1W2 868 aaKnown RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 PROX2Q3B8N5 592 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ZNF404Q494X3 552 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SOWAHCQ53LP3 525 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SERPINA11Q86U17 422 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 TMEM173Q86WV6 379 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-205ENST00000571272 P3H2Q8IVL5 708 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 CLECL1Q8IZS7 167 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ITPAQ9BY32 194 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 ATP11BQ9Y2G3 1177 aa16.95■□□□□ 0.3
SCARF1-205ENST00000571272 SMAD6O43541 496 aaKnown RBP16.94■□□□□ 0.3
SCARF1-205ENST00000571272 ADAMTS4O75173 837 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 UPK1BO75841 260 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 DLGAP3O95886 979 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 TTLL9Q3SXZ7 439 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 RNF165Q6ZSG1 346 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 CHST9Q7L1S5 443 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 PTOV1Q86YD1 416 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 NELL1Q92832 810 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 SLC38A4Q969I6 547 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 TESCQ96BS2 214 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 YIPF2Q9BWQ6 316 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 RNF167Q9H6Y7 350 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 RPS6KA6Q9UK32 745 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 CLDN24A6NM45 220 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 NUDT7P0C024 238 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 GADD45AP24522 165 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 GTF2E2P29084 291 aaKnown RBP16.94■□□□□ 0.3
SCARF1-205ENST00000571272 HNF1BP35680 557 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 PPP3CCP48454 512 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 NKX2-5P52952 324 aaPredicted RBP16.94■□□□□ 0.3
SCARF1-205ENST00000571272 STEAP3Q658P3 488 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 FUT10Q6P4F1 479 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 TSPAN33Q86UF1 283 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 FAM83FQ8NEG4 500 aaPredicted RBP16.94■□□□□ 0.3
SCARF1-205ENST00000571272 STARD8Q92502 1023 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 TBC1D20Q96BZ9 403 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 ITM2CQ9NQX7 267 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 MARCH5Q9NX47 278 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 SNX6Q9UNH7 406 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 HTTP42858 3142 aa16.94■□□□□ 0.3
SCARF1-205ENST00000571272 LOC100506127A0A0U1RQW1 187 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 EPN2O95208 641 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 HOXB6P17509 224 aaKnown RBP16.93■□□□□ 0.3
SCARF1-205ENST00000571272 ITPKAP23677 461 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 RCVRNP35243 200 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 NUDT6P53370 316 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 HSPA14Q0VDF9 509 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 C1QTNF12Q5T7M4 302 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 NOXRED1Q6NXP6 359 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 ANKS3Q6ZW76 656 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 WFDC5Q8TCV5 224 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 RUBCNLQ9H714 662 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 RDH14Q9HBH5 336 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 RNF6Q9Y252 685 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 PCDHGA6Q9Y5G7 932 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 C2orf78A6NCI8 922 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 M0R082 166 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 SH3BGRLO75368 114 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 CKBP12277 381 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 FADDQ13158 208 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 DUOXA1Q1HG43 343 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 PTCHD3Q3KNS1 767 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 NEK5Q6P3R8 708 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 MACC1Q6ZN28 852 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 UBE2R2Q712K3 238 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-205ENST00000571272 SYT12Q8IV01 421 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 ELMOD1Q8N336 334 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 IPCEF1Q8WWN9 437 aaPredicted RBP16.93■□□□□ 0.3
SCARF1-205ENST00000571272 SIAEQ9HAT2 523 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 NMRK2Q9NPI5 230 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 ITGB1BP2Q9UKP3 347 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 SLC22A14Q9Y267 594 aa16.93■□□□□ 0.3
SCARF1-205ENST00000571272 A0A1W2PQ67 120 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 TTC36A6NLP5 189 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 MAGEB17A8MXT2 336 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 PRAMEF4O60810 478 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 CSKP41240 450 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 SLC11A1P49279 550 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 PCYT1AP49585 367 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 PRAMEF9Q5VWM5 478 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 MAL2Q969L2 176 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 CMTM7Q96FZ5 175 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 SIGLEC11Q96RL6 698 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 CDK5RAP1Q96SZ6 601 aaKnown RBP16.92■□□□□ 0.3
SCARF1-205ENST00000571272 TRBC1P01850 177 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 SEMG1P04279 462 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 SPNP16150 400 aa16.92■□□□□ 0.3
SCARF1-205ENST00000571272 AMD1P17707 334 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms