RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 SLC22A11Q9NSA0 550 aa16.5■□□□□ 0.23
RPA1-203ENST00000571058 GPR83Q9NYM4 423 aa16.5■□□□□ 0.23
RPA1-203ENST00000571058 CDC14AQ9UNH5 594 aa16.5■□□□□ 0.23
RPA1-203ENST00000571058 CHMP2BQ9UQN3 213 aa16.5■□□□□ 0.23
RPA1-203ENST00000571058 PABPN1LA6NDY0 278 aaKnown RBP16.49■□□□□ 0.23
RPA1-203ENST00000571058 K7EM74 188 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 PRPF4O43172 522 aaKnown RBP eCLIP16.49■□□□□ 0.23
RPA1-203ENST00000571058 DPM1O60762 260 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 MMP11P24347 488 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 CCND1P24385 295 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 GABRB3P28472 473 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 IMPA1P29218 277 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 IL2P60568 153 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 CBLBQ13191 982 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 PRTGQ2VWP7 1150 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 DCAF10Q5QP82 559 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 THEMIS2Q5TEJ8 643 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 GARNL3Q5VVW2 1013 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 FBXO42Q6P3S6 717 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 MAATS1Q7Z4T9 603 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 EEF1AKMT1Q8WVE0 214 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 CFAP36Q96G28 342 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 TRIM51Q9BSJ1 452 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 PARVBQ9HBI1 364 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 ZNF304Q9HCX3 659 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 CCDC177Q9NQR7 707 aaPredicted RBP16.49■□□□□ 0.23
RPA1-203ENST00000571058 P4HTMQ9NXG6 502 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 C5AR2Q9P296 337 aa16.49■□□□□ 0.23
RPA1-203ENST00000571058 LOC105369274A0A096LPK9 316 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 IGKV1-8A0A0C4DH67 115 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 LOC102723532A0A0G2JNH3 316 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 FAM187AA6NFU0 413 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 E7ESA3 106 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 H0YGG7 62 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 AGPSO00116 658 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 CNOT3O75175 753 aaKnown RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 ALPPP05187 535 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 EIF2S1P05198 315 aaKnown RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 UMODP07911 640 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 HIST1H2AGP0C0S8 130 aaPredicted RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 NR1D1P20393 614 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 HIST1H2ADP20671 130 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 SOX8P57073 446 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 ARF3P61204 181 aaPredicted RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 TIAL1Q01085 375 aaKnown RBP eCLIP16.48■□□□□ 0.23
RPA1-203ENST00000571058 PDAP1Q13442 181 aaKnown RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 NKG7Q16617 165 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 FAM45BPQ6NSW5 357 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 PAQR3Q6TCH7 311 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 LRRC56Q8IYG6 542 aaPredicted RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 OR4N4Q8N0Y3 316 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 PPFIBP2Q8ND30 876 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 FDCSPQ8NFU4 85 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 FAM45AQ8TCE6 357 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 HIST1H2AHQ96KK5 128 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 KRT12Q99456 494 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 SMAD5Q99717 465 aaKnown RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 HIST1H2AJQ99878 128 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 H2AFJQ9BTM1 129 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 TRIM54Q9BYV2 358 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 SEMA3GQ9NS98 782 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 NSMCE4AQ9NXX6 385 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 ZFATQ9P243 1243 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 VWA7Q9Y334 891 aa16.48■□□□□ 0.23
RPA1-203ENST00000571058 MDC1Q14676 2089 aaKnown RBP16.48■□□□□ 0.23
RPA1-203ENST00000571058 VSTM2BA6NLU5 285 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 IPO13O94829 963 aaKnown RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 PDGFAP04085 211 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 CDKN2DP55273 166 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 AP1S2P56377 157 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 FOXK1P85037 733 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 OCA2Q04671 838 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 MGAT5Q09328 741 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 PDIA2Q13087 525 aaKnown RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 CALCOCO2Q13137 446 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 HP1BP3Q5SSJ5 553 aaPredicted RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 RBM20Q5T481 1227 aaKnown RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 VWA5B1Q5TIE3 1220 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 HECTD2Q5U5R9 776 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 PRAMEF13Q5VWM6 474 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 COX15Q7KZN9 410 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 PPP1R32Q7Z5V6 425 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 SLC26A11Q86WA9 606 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 CSNK1A1LQ8N752 337 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 GPATCH11Q8N954 259 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 COL26A1Q96A83 441 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 LINGO1Q96FE5 620 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 CABS1Q96KC9 395 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 OR2A5Q96R48 311 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 SPSB2Q99619 263 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 FAM129AQ9BZQ8 928 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 TRIM31Q9BZY9 425 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 PLAC1Q9HBJ0 212 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 ATP13A2Q9NQ11 1180 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 TMEM184CQ9NVA4 438 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 STOX2Q9P2F5 926 aaPredicted RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 ZNF282Q9UDV7 671 aaPredicted RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 PDE10AQ9Y233 779 aa16.47■□□□□ 0.23
RPA1-203ENST00000571058 UBR5O95071 2799 aaPredicted RBP16.47■□□□□ 0.23
RPA1-203ENST00000571058 NUP210LQ5VU65 1888 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms