RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 E7EQ34 232 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 BTN3A3O00478 584 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PPM1DO15297 605 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TAPBPO15533 448 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PRMT3O60678 531 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CLDN9O95484 217 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ESRRBO95718 433 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 LDOC1O95751 146 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ENO1P06733 434 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CKMT1AP12532 417 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CDH1P12830 882 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SNRPBP14678 240 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 UGT2B7P16662 529 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TYRP1P17643 537 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TSPAN8P19075 237 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CDH3P22223 829 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CXCR2P25025 360 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PSMB5P28074 263 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GGT5P36269 586 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GDF5P43026 501 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCR8P51685 355 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GYS2P54840 703 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CDH13P55290 713 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHIT1Q13231 466 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 LAPTM5Q13571 262 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 FASTKQ14296 549 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GRB7Q14451 532 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 HIST2H2ACQ16777 129 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SH2D4BQ5SQS7 431 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ICE2Q659A1 982 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF787Q6DD87 383 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 HIST2H2AA3Q6FI13 130 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM214Q6NUQ4 689 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GUSBP11Q6P575 273 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SPESP1Q6UW49 350 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 RGS9BPQ6ZS82 235 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 RPS27LQ71UM5 84 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PRICKLE2Q7Z3G6 844 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF438Q7Z4V0 828 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SPRED1Q7Z699 444 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 MILR1Q7Z6M3 343 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CUZD1Q86UP6 607 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 C17orf82Q86X59 251 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PLXDC1Q8IUK5 500 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 WDR75Q8IWA0 830 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SFTPA2Q8IWL1 248 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 KRT78Q8N1N4 520 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TMEM151AQ8N4L1 468 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 LINC01555Q8NAE3 123 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 IFI44Q8TCB0 444 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF75CPQ92670 426 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 RSC1A1Q92681 617 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 N4BP2L2Q92802 583 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 UBE2E3Q969T4 207 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GRAMD1AQ96CP6 724 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 REPS1Q96D71 796 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PTCD3Q96EY7 689 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHMP6Q96FZ7 201 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZDHHC12Q96GR4 267 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 FAR2Q96K12 515 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 C7orf26Q96N11 449 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 NSUN5Q96P11 429 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ZNF382Q96SR6 550 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CD180Q99467 661 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CDC6Q99741 560 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 AIF1LQ9BQI0 150 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 CCDC3Q9BQI4 270 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 EFCAB11Q9BUY7 163 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SGPP1Q9BX95 441 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 C1QTNF3Q9BXJ4 246 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PITPNM3Q9BZ71 974 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SHCBP1LQ9BZQ2 653 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 FAM107BQ9H098 131 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ILKAPQ9H0C8 392 aaPredicted RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ABCG4Q9H172 646 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 GSTO2Q9H4Y5 243 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ELOVL6Q9H5J4 265 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 NOL11Q9H8H0 719 aaKnown RBP6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 MID1IP1Q9NPA3 183 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 PFDN4Q9NQP4 134 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ACSS2Q9NR19 701 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 THAP1Q9NVV9 213 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 SOHLH2Q9NX45 425 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 ACTR10Q9NZ32 417 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 BTBD3Q9Y2F9 522 aa6.35□□□□□ -1.39
CTDNEP1-204ENST00000570484 TNRC6BQ9UPQ9 1833 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 IGHV1OR21-1A0A087WYE8 117 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SERTM1A2A2V5 107 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 TLCD2A6NGC4 264 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 PROB1E7EW31 1015 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SLCO1B7G3V0H7 640 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 UGDHO60701 494 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 SKAP2O75563 359 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 LYPLA1O75608 230 aaPredicted RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 KRT6AP02538 564 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 KRT6BP04259 564 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 RPLP0P05388 317 aaKnown RBP6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 GP1BAP07359 652 aa6.34□□□□□ -1.39
CTDNEP1-204ENST00000570484 CHRNGP07510 517 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms