RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 RFX6Q8HWS3 928 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZZZ3Q8IYH5 903 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 CLYBLQ8N0X4 340 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 CPSF7Q8N684 471 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 FAM98AQ8NCA5 519 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 LRRN4CLQ8ND94 238 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 TFB1MQ8WVM0 346 aaKnown RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 RMND5BQ96G75 393 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 SEC16BQ96JE7 1060 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 APOL2Q9BQE5 337 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 FSD1LQ9BXM9 530 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 TGIF2Q9GZN2 237 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 NUP62CLQ9H1M0 184 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 CLEC4MQ9H2X3 399 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 MKKSQ9NPJ1 570 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 KLHL8Q9P2G9 620 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 GNPTGQ9UJJ9 305 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 FAM169AQ9Y6X4 670 aa9.87□□□□□ -0.83
CTDNEP1-202ENST00000570380 ATRQ13535 2644 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 A0A087X0T9 212 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 AP2A2O94973 939 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 CRTAMO95727 393 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 FAM228BP0C875 321 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 C8orf89P0DMQ9 161 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZFXP17010 805 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZNF24P17028 368 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 HOXC12P31275 282 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 MAPKAPK3Q16644 382 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 SYT16Q17RD7 645 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 PRTGQ2VWP7 1150 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 LANCL3Q6ZV70 420 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 TAS2R42Q7RTR8 314 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 VSIG1Q86XK7 387 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 CDC20BQ86Y33 519 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZC3H7AQ8IWR0 971 aaKnown RBP9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 PIANPQ8IYJ0 282 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 PWWP2AQ96N64 755 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 GORASP1Q9BQQ3 440 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 KCNK13Q9HB14 408 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 RASSF1Q9NS23 344 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 CDC14AQ9UNH5 594 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 KLK4Q9Y5K2 254 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 ARHGAP21Q5T5U3 1957 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 NBEAL1Q6ZS30 2694 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 TLN2Q9Y4G6 2542 aa9.86□□□□□ -0.83
CTDNEP1-202ENST00000570380 EML6Q6ZMW3 1958 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 GABRR3A8MPY1 467 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 SUN1O94901 812 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 FKBP9O95302 570 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 LY6G6DO95868 133 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 PECAM1P16284 738 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 PSMB5P28074 263 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 PCSK6P29122 969 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 ADRA1AP35348 466 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 EMP3P54852 163 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 CSE1LP55060 971 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 NUP107P57740 925 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 MYL5Q02045 173 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 OC90Q02509 493 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 PMPCAQ10713 525 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 SNTB1Q13884 538 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 DBN1Q16643 649 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 EMC4Q5J8M3 183 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 ZNF468Q5VIY5 522 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 FBXO42Q6P3S6 717 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 RNF44Q7L0R7 432 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 CPEB2Q7Z5Q1 589 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 KRTAP1-3Q8IUG1 177 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 TMTC1Q8IUR5 882 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 ACRBPQ8NEB7 543 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 RNF25Q96BH1 459 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 MVB12AQ96EY5 273 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 MMABQ96EY8 250 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 DNAJC1Q96KC8 554 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 CABS1Q96KC9 395 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 OLFM1Q99784 485 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 C19orf43Q9BQ61 176 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 TP63Q9H3D4 680 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 SYNPO2LQ9H987 977 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 SMARCAL1Q9NZC9 954 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 CTTNBP2NLQ9P2B4 639 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 RSPH14Q9UHP6 348 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 EDARQ9UNE0 448 aa9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 RUVBL1Q9Y265 456 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-202ENST00000570380 H0YGG7 62 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 PRPF4O43172 522 aaKnown RBP eCLIP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 FOXS1O43638 330 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 NME2P1O60361 137 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 FTH1P02794 183 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 ERVK-10P10266 1014 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 NME2P22392 152 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 NR2C2P49116 596 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 GEMP55040 296 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 ARF3P61204 181 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 YBX1P67809 324 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 MAT1AQ00266 395 aaKnown RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 PLOD1Q02809 727 aaPredicted RBP9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 DEFB113Q30KQ7 82 aa9.84□□□□□ -0.83
CTDNEP1-202ENST00000570380 SYTL3Q4VX76 610 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms