RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 ZBTB14O43829 449 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 NRP2O60462 931 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 HAUS5O94927 633 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ALPPP05187 535 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 HRH2P25021 359 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TIAL1Q01085 375 aaKnown RBP eCLIP16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 UBAP2LQ14157 1087 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 HSP90AA5PQ58FG0 334 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 COLEC12Q5KU26 742 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SPANXN3Q5MJ09 141 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 UGT3A1Q6NUS8 523 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 OR4N4Q8N0Y3 316 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CPT1CQ8TCG5 803 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 VPS50Q96JG6 964 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 C10orf90Q96M02 699 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 RUNDC3BQ96NL0 473 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 OR2A5Q96R48 311 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 DDX47Q9H0S4 455 aaKnown RBP16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZNF552Q9H707 407 aaPredicted RBP16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZNF304Q9HCX3 659 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ATP13A2Q9NQ11 1180 aa16.31■□□□□ 0.2
MAP1LC3B-208ENST00000570189 A0A0J9YVX5 310 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 H0YGG7 62 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TXNDC9O14530 226 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MED26O95402 600 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 IMPA1P29218 277 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CARSP49589 748 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ARF3P61204 181 aaPredicted RBP16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 YBX1P67809 324 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MPP1Q00013 466 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CBLBQ13191 982 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SP140Q13342 867 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CUL1Q13616 776 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FRG1Q14331 258 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MORF4L2Q15014 288 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SLC6A19Q695T7 634 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SUSD1Q6UWL2 747 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 LRRC39Q96DD0 335 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PDLIM2Q96JY6 352 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ACAT2Q9BWD1 397 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TAS2R13Q9NYV9 303 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CTSFQ9UBX1 484 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZC3H7BQ9UGR2 993 aaKnown RBP16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ASIC3Q9UHC3 531 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TAC3Q9UHF0 121 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CORO1CQ9ULV4 474 aaPredicted RBP16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 HS3ST3B1Q9Y662 390 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ESPL1Q14674 2120 aa16.3■□□□□ 0.2
MAP1LC3B-208ENST00000570189 A6NL46 340 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PCDH17O14917 1159 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SLC16A5O15375 505 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PRPF4O43172 522 aaKnown RBP eCLIP16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 C8GP07360 202 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 OR1D4P47884 311 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SRSF1Q07955 248 aaKnown RBP eCLIP16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 DHX9Q08211 1270 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 DSG2Q14126 1118 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 MSS51Q4VC12 460 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PRAMEF13Q5VWM6 474 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 KIRREL2Q6UWL6 708 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 IGFL2Q6UWQ7 119 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CREG2Q8IUH2 290 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TMEM151BQ8IW70 566 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CPNE9Q8IYJ1 553 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FAM26EQ8N5C1 309 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 EFCAB3Q8N7B9 438 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TM9SF4Q92544 642 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CCDC138Q96M89 665 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PCBD2Q9H0N5 130 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PLAC1Q9HBJ0 212 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 IARS2Q9NSE4 1012 aaKnown RBP16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ZNF282Q9UDV7 671 aaPredicted RBP16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CDC14AQ9UNH5 594 aa16.29■□□□□ 0.2
MAP1LC3B-208ENST00000570189 F7P08709 466 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 ERVK-10P10266 1014 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 GABRB3P28472 473 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 RGS4P49798 205 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FOXL2P58012 376 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FAM53BQ14153 422 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 STEAP4Q687X5 459 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 UBE2R2Q712K3 238 aaPredicted RBP16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 PIWIL4Q7Z3Z4 852 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 STT3BQ8TCJ2 826 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CERS2Q96G23 380 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TGIF2Q9GZN2 237 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 SYNPO2LQ9H987 977 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TRMT1Q9NXH9 659 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TRMT6Q9UJA5 497 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 TSR3Q9UJK0 312 aaKnown RBP16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CDC23Q9UJX2 597 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 FBXL4Q9UKA2 621 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 B3GNT3Q9Y2A9 372 aa16.28■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CNTRLQ7Z7A1 2325 aa16.27■□□□□ 0.2
MAP1LC3B-208ENST00000570189 USP9YO00507 2555 aaPredicted RBP16.27■□□□□ 0.2
MAP1LC3B-208ENST00000570189 KCNE1BA0A087WTH5 132 aa16.27■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CCDC188H7C350 402 aa16.27■□□□□ 0.2
MAP1LC3B-208ENST00000570189 VPS4BO75351 444 aa16.27■□□□□ 0.2
MAP1LC3B-208ENST00000570189 AHSGP02765 367 aa16.27■□□□□ 0.2
MAP1LC3B-208ENST00000570189 CYC1P08574 325 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms