RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 RUFY1Q96T51 708 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 TMEM121Q9BTD3 319 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 DPH5Q9H2P9 285 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ZDHHC18Q9NUE0 388 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 TMEM248Q9NWD8 314 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 GRHL1Q9NZI5 618 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ANAPC5Q9UJX4 755 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 STOML2Q9UJZ1 356 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 INTS6Q9UL03 887 aaKnown RBP6.99□□□□□ -1.29
CNOT1-222ENST00000570139 MKLN1Q9UL63 735 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 CAPN7Q9Y6W3 813 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 DENND4CQ5VZ89 1909 aa6.99□□□□□ -1.29
CNOT1-222ENST00000570139 ANAPC1Q9H1A4 1944 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TRAV19A0A0A6YYK7 116 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CXorf51AA0A1B0GTR3 108 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TMEM247A6NEH6 219 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ZSCAN5CA6NGD5 496 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ARHGAP42A6NI28 874 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ERI2A8K979 691 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 MCIDASD6RGH6 385 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SCAMP1O15126 338 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 KCNN4O15554 427 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 COCHO43405 550 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SUV39H1O43463 412 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 NUAK1O60285 661 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ACSL4O60488 711 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 PPFIA2O75334 1257 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CLDN11O75508 207 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 MOCS2O96007 188 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 IFNB1P01574 187 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TPSB2P20231 275 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CCNCP24863 283 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 NDUFS1P28331 727 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 MAGEA6P43360 314 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SLC15A1P46059 708 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 RPL21P46778 160 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CAPZA2P47755 286 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CLK3P49761 638 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 YBEYP58557 167 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 GBE1Q04446 702 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 FRG1Q14331 258 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SHHQ15465 462 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TPSAB1Q15661 275 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 PARP15Q460N3 678 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CCDC92Q53HC0 331 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 MS4A13Q5J8X5 152 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 C9orf50Q5SZB4 431 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 RWDD4Q6NW29 188 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TRMT10CQ7L0Y3 403 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 WDR53Q7Z5U6 358 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 CHSY1Q86X52 802 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TMC8Q8IU68 726 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 UMODL1-AS1Q8N2C9 162 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ZCCHC9Q8N567 271 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ATPAF2Q8N5M1 289 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 POGLUT1Q8NBL1 392 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SETD9Q8NE22 299 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 FBXO25Q8TCJ0 367 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 EXOC4Q96A65 974 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SLC22A18Q96BI1 424 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 LOXL4Q96JB6 756 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SPATA13Q96N96 652 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TSGA13Q96PP4 275 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 H2AFJQ9BTM1 129 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 ADGRE3Q9BY15 652 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 MRPL1Q9BYD6 325 aaKnown RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 TRIM2Q9C040 744 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 KIF9Q9HAQ2 790 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SLC28A3Q9HAS3 691 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 MED4Q9NPJ6 270 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 KIAA1456Q9P272 454 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 FZD4Q9ULV1 537 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 DHDHQ9UQ10 334 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 NEU3Q9UQ49 428 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 SNX24Q9Y343 169 aa6.98□□□□□ -1.29
CNOT1-222ENST00000570139 NUP210Q8TEM1 1887 aaPredicted RBP6.98□□□□□ -1.29
CNOT1-222ENST00000570139 A0A1W2PQF6 199 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 ARHGAP10A1A4S6 786 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 OR6C68A6NDL8 312 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 HIDE1A8MVS5 230 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 A8MXE2 369 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 NPIPB6E9PJ23 425 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 FAM72CH0Y354 149 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 I6L893 689 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CTDSP2O14595 271 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 MAP2K7O14733 419 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 PSMD3O43242 534 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 TBX10O75333 385 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 SPAG6O75602 509 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CNTN5O94779 1100 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 HLA-DQA2P01906 255 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 PRR35P0CG20 571 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 MBL2P11226 248 aaPredicted RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 TACR2P21452 398 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 DNAJB1P25685 340 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 IVDP26440 423 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CALRP27797 417 aaKnown RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 GABRR2P28476 465 aa6.97□□□□□ -1.29
CNOT1-222ENST00000570139 CORO1AP31146 461 aaKnown RBP6.97□□□□□ -1.29
CNOT1-222ENST00000570139 NRIP1P48552 1158 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms