RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 SEPT1Q8WYJ6 367 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 DNASE2BQ8WZ79 361 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 ARHGAP45Q92619 1136 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 TOP1MTQ969P6 601 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 EXOC4Q96A65 974 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 PPP1R13BQ96KQ4 1090 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 LINC00615Q96LM1 132 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 RAB3IPQ96QF0 476 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 GAD1Q99259 594 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 CCDC106Q9BWC9 280 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 FUT8Q9BYC5 575 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 IFIH1Q9BYX4 1025 aaKnown RBP3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 EBF2Q9HAK2 575 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 C17orf75Q9HAS0 396 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 VAT1LQ9HCJ6 419 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 MMP25Q9NPA2 562 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 SLC6A13Q9NSD5 602 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 CNOT8Q9UFF9 292 aaKnown RBP3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 CTNNA3Q9UI47 895 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 TUBE1Q9UJT0 475 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 ICAM5Q9UMF0 924 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 PPIEQ9UNP9 301 aaKnown RBP3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 MTMR6Q9Y217 621 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 DMDP11532 3685 aa3.24□□□□□ -1.89
HMGB1P6-201ENST00000569046 ZBED9Q6R2W3 1325 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 IGHV4OR15-8A0A075B7B6 117 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 A0A0G2JPF8 293 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 LRRC53A6NM62 1247 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 HNRNPCL3B7ZW38 293 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PSMA7O14818 248 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 GPAA1O43292 621 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 SPRY1O43609 319 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 RANBP6O60518 1105 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 KINO60870 393 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TADA2AO75478 443 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 RFPL2O75678 378 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 RECQL5O94762 991 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TPPPO94811 219 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 IPO7O95373 1038 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 GH1P01241 217 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ICAM1P05362 532 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 F7P08709 466 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 HNRNPCL4P0DMR1 293 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 IRF1P10914 325 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 FDPSP14324 419 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 CASTP20810 708 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 MC5RP33032 325 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 CAMPP49913 170 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 METAP2P50579 478 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PNLIPRP2P54317 469 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 GALCP54803 685 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 POLR2FP61218 127 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ECT2LQ008S8 904 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 SP4Q02446 784 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ACTN3Q08043 901 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 SLC20A2Q08357 652 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 SIGLEC14Q08ET2 396 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 NAE1Q13564 534 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 BTG3Q14201 252 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 LETM2Q2VYF4 491 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 HSDL1Q3SXM5 330 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TTC31Q49AM3 519 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 SBK1Q52WX2 424 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PLEKHA7Q6IQ23 1121 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 UNC5DQ6UXZ4 953 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 CFAP77Q6ZQR2 320 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 RBPMS2Q6ZRY4 209 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TUBA1AQ71U36 451 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 OTOAQ7RTW8 1153 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 LCA5Q86VQ0 697 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ODF3L1Q8IXM7 274 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 DSELQ8IZU8 1212 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 MUC20Q8N307 709 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TRIML1Q8N9V2 468 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 XXYLT1Q8NBI6 393 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 VN1R2Q8NFZ6 395 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 FIG4Q92562 907 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ATP6V0A1Q93050 837 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 FAM162AQ96A26 154 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TMEM19Q96HH6 336 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 SLC41A2Q96JW4 573 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 CCDC43Q96MW1 224 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TMEM237Q96Q45 408 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TSPAN18Q96SJ8 248 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PCYT2Q99447 389 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 FAM110AQ9BQ89 295 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 TUBA1CQ9BQE3 449 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 MRPL1Q9BYD6 325 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 CSTL1Q9H114 145 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PLK3Q9H4B4 646 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PDZD7Q9H5P4 517 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PPP1R3EQ9H7J1 279 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 KIF9Q9HAQ2 790 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 HINT3Q9NQE9 182 aaKnown RBP3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 PDRG1Q9NUG6 133 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 ADPRHL2Q9NX46 363 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 OGFRQ9NZT2 677 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 DLGAP2Q9P1A6 1054 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 HAO1Q9UJM8 370 aa3.23□□□□□ -1.89
HMGB1P6-201ENST00000569046 CEPT1Q9Y6K0 416 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms