RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SMAPO00193 183 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 IVDP26440 423 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 RGS4P49798 205 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 FOXL2P58012 376 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 YBX1P67809 324 aaKnown RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 ABATP80404 500 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 DR1Q01658 176 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 PRDX1Q06830 199 aaKnown RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 IGFBP7Q16270 282 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 DCAF10Q5QP82 559 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 ICE2Q659A1 982 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 CYHR1Q6ZMK1 362 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 KIAA0408Q6ZU52 694 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 UBE2R2Q712K3 238 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 HPS6Q86YV9 775 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 OR4N4Q8N0Y3 316 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 MMGT1Q8N4V1 131 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 METTL27Q8N6F8 245 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 CLEC1AQ8NC01 280 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 PPFIBP2Q8ND30 876 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 NDNQ99608 321 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 PLCD4Q9BRC7 762 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 NUDT9Q9BW91 350 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 SLC26A1Q9H2B4 701 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 TAS2R13Q9NYV9 303 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 ZC3H7BQ9UGR2 993 aaKnown RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 NXT1Q9UKK6 140 aaKnown RBP13.8□□□□□ -0.2
CMTM3-215ENST00000568477 CCDC88CQ9P219 2028 aa13.8□□□□□ -0.2
CMTM3-215ENST00000568477 E7ENX8 843 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 H0YGG7 62 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CCDC188H7C350 402 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 DPM1O60762 260 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 H2AFXP16104 143 aaPredicted RBP13.79□□□□□ -0.2
CMTM3-215ENST00000568477 SKIV2L2P42285 1042 aaKnown RBP13.79□□□□□ -0.2
CMTM3-215ENST00000568477 OR1D4P47884 311 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CARSP49589 748 aaKnown RBP13.79□□□□□ -0.2
CMTM3-215ENST00000568477 ARF3P61204 181 aaPredicted RBP13.79□□□□□ -0.2
CMTM3-215ENST00000568477 TAP2Q03519 686 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 RAPSNQ13702 412 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 NKG7Q16617 165 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 MUM1Q2TAK8 710 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 THEMIS2Q5TEJ8 643 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 PRMT9Q6P2P2 845 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 FBXO42Q6P3S6 717 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 MTERF4Q7Z6M4 381 aaKnown RBP13.79□□□□□ -0.2
CMTM3-215ENST00000568477 PAQR7Q86WK9 346 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 IGDCC3Q8IVU1 814 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CNTN4Q8IWV2 1026 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 SPATA4Q8NEY3 305 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 NACC2Q96BF6 587 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CERS2Q96G23 380 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CFAP36Q96G28 342 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 SPSB2Q99619 263 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 PPANQ9NQ55 473 aaKnown RBP13.79□□□□□ -0.2
CMTM3-215ENST00000568477 ABCF3Q9NUQ8 709 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CTSFQ9UBX1 484 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 CHMP2BQ9UQN3 213 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 PCM1Q15154 2024 aa13.79□□□□□ -0.2
CMTM3-215ENST00000568477 PCSK5Q92824 1860 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 HEATR5BQ9P2D3 2071 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 IGKV1-8A0A0C4DH67 115 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 TTLL8A6PVC2 850 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 KLHL41O60662 606 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ALPPP05187 535 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 C8GP07360 202 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 EZRP15311 586 aaKnown RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 MMP11P24347 488 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 GABRB3P28472 473 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 IMPA1P29218 277 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ELK3P41970 407 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 EMP3P54852 163 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 MLLT10P55197 1068 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ARL4CP56559 192 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 HIF1AQ16665 826 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 PRTGQ2VWP7 1150 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 NADK2Q4G0N4 442 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 RBM20Q5T481 1227 aaKnown RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 VWA5B1Q5TIE3 1220 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ZNF425Q6IV72 752 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 HIBCHQ6NVY1 386 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ADCK2Q7Z695 626 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 ATCAYQ86WG3 371 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 TMEM151BQ8IW70 566 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 PALM2Q8IXS6 379 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 MYO1HQ8N1T3 1032 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 GALNT16Q8N428 558 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 CSNK1A1LQ8N752 337 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 NOA1Q8NC60 698 aaKnown RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 RERGQ96A58 199 aaPredicted RBP13.78□□□□□ -0.2
CMTM3-215ENST00000568477 COL26A1Q96A83 441 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 MIB2Q96AX9 1013 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 LRRC39Q96DD0 335 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 SNF8Q96H20 258 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 CABS1Q96KC9 395 aa13.78□□□□□ -0.2
CMTM3-215ENST00000568477 SMAD5Q99717 465 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms