RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 STSP08842 583 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 MAP2K3P46734 347 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 PTPRCAPQ14761 206 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 RAB6CQ53S08 254 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 LRRC66Q68CR7 880 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 CXCL17Q6UXB2 119 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 BEND5Q7L4P6 421 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 C17orf64Q86WR6 236 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR5AK3PQ8NH89 298 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 CEP76Q8TAP6 659 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 NDNFQ8TB73 568 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 CDCA5Q96FF9 252 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF778Q96MU6 729 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 MGLLQ99685 303 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 RAB6CQ9H0N0 254 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 LRRC14BA6NHZ5 514 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 LOC730098B7Z3J9 87 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 SCNN1AP37088 669 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 GRIA2P42262 883 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 GABARAPL2P60520 117 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 TCEA2Q15560 299 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 TARBP2Q15633 366 aaKnown RBP12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 CRY2Q49AN0 593 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ANKRD26P1Q6NSI1 321 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 HACD2Q6Y1H2 254 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 KLHL36Q8N4N3 616 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 KDM1BQ8NB78 822 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 MAPKAP1Q9BPZ7 522 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 OCEL1Q9H607 264 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ENAMQ9NRM1 1142 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ARMC1Q9NVT9 282 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 RIIAD1A6NNX1 92 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 G3V2L1 256 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 DCLK1O15075 740 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF432O94892 652 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 LAMP2P13473 410 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 HSD17B1P14061 328 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 HNMTP50135 292 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 MRPS6P82932 125 aaKnown RBP12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 GALNT2Q10471 571 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 UNC50Q53HI1 259 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ARL9Q6T311 187 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 GOLGA7Q7Z5G4 137 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF366Q8N895 744 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 SYT11Q9BT88 431 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 TPT1P8Q9HAU6 139 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
CSPG4P13-202ENST00000567704 NT5C1B-RDH14C9J2C7 533 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 AKAP8O43823 692 aaKnown RBP12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 GRIN3BO60391 1043 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 TRIM3O75382 744 aaPredicted RBP12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR7A10O76100 309 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 PCSK2P16519 638 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 PCSK6P29122 969 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 ERP29P30040 261 aaKnown RBP12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 CD52P31358 61 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 HCAR3P49019 387 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 TSPAN5P62079 268 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 C10orf62Q5T681 223 aaPredicted RBP12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 UBE2Q1Q7Z7E8 422 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 TMEM135Q86UB9 458 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF598Q86UK7 904 aaKnown RBP12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 GOLM1Q8NBJ4 401 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 RNASE11Q8TAA1 199 aaKnown RBP12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF69Q9UC07 566 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 SIX4Q9UIU6 781 aa12.08□□□□□ -0.47
CSPG4P13-202ENST00000567704 STRCP1A6NGW2 1772 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 J3KR12 359 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 TOXO94900 526 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 APOL3O95236 402 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 MAN2A2P49641 1150 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 DUOXA1Q1HG43 343 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 WDR45BQ5MNZ6 344 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 RPTNQ6XPR3 784 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 TCEANCQ8N8B7 351 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 C1orf216Q8TAB5 229 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 UROC1Q96N76 676 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 DHRS4Q9BTZ2 278 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 MINDY3Q9H8M7 445 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 CYTH4Q9UIA0 394 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 PCDHGB6Q9Y5F9 930 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 ZNF780BQ9Y6R6 833 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 COL16A1Q07092 1604 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 A0A075B6Q4 140 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 C7orf72A4D263 438 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC35F4A4IF30 521 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 SAP18O00422 153 aaKnown RBP12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 IRAK2O43187 625 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 CNTN5O94779 1100 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 STEAP4Q687X5 459 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 ARRDC4Q8NCT1 418 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 FRS2Q8WU20 508 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 GEMIN6Q8WXD5 167 aaKnown RBP12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 TMEM80Q96HE8 168 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 SLC35A5Q9BS91 424 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 UCK2Q9BZX2 261 aa12.08□□□□□ -0.48
CSPG4P13-202ENST00000567704 NSUN3Q9H649 340 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms