RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	PCSK5	Q92824	1860 aa		6.62	□□□□□ -1.35
SF3B3-209	ENST00000567635	PTPN13	Q12923	2485 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ICE1	Q9Y2F5	2266 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635		E7ENX8	843 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635		H0YGG7	62 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CCDC188	H7C350	402 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	TTI1	O43156	1089 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	KLHL41	O60662	606 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CNOT3	O75175	753 aa	Known RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CCNDBP1	O95273	360 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PDGFA	P04085	211 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	EIF2S1	P05198	315 aa	Known RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ITGAX	P20702	1163 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	GABRB3	P28472	473 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	OR1D4	P47884	311 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CARS	P49589	748 aa	Known RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	RGS4	P49798	205 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ITGA8	P53708	1063 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	EMP3	P54852	163 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ARL4C	P56559	192 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ARF3	P61204	181 aa	Predicted RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ABAT	P80404	500 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	TIAL1	Q01085	375 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	TAP2	Q03519	686 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	RELA	Q04206	551 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	IGFBP7	Q16270	282 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PRTG	Q2VWP7	1150 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	COLEC12	Q5KU26	742 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	TEDDM1	Q5T9Z0	273 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ICE2	Q659A1	982 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	FRMPD2B	Q6IN97	320 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	LRRC8E	Q6NSJ5	796 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PRMT9	Q6P2P2	845 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	UBE2R2	Q712K3	238 aa	Predicted RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	MRGPRE	Q86SM8	312 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PAQR7	Q86WK9	346 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	HPS6	Q86YV9	775 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CNTN4	Q8IWV2	1026 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PALM2	Q8IXS6	379 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CPNE9	Q8IYJ1	553 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CLEC1A	Q8NC01	280 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	FDCSP	Q8NFU4	85 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF480	Q8WV37	535 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	NACC2	Q96BF6	587 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	LRRC39	Q96DD0	335 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CERS2	Q96G23	380 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CFAP36	Q96G28	342 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	SNF8	Q96H20	258 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CCDC138	Q96M89	665 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZFYVE21	Q9BQ24	234 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC26A1	Q9H2B4	701 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PARVB	Q9HBI1	364 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF304	Q9HCX3	659 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC6A20	Q9NP91	592 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ATP13A2	Q9NQ11	1180 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	PPAN	Q9NQ55	473 aa	Known RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	ABCF3	Q9NUQ8	709 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	P4HTM	Q9NXG6	502 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	GPR83	Q9NYM4	423 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	TRMT6	Q9UJA5	497 aa	Known RBP	6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	CDC14A	Q9UNH5	594 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	TEX264	Q9Y6I9	313 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	GTF3C1	Q12789	2109 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	MYO7B	Q6PIF6	2116 aa		6.61	□□□□□ -1.35
SF3B3-209	ENST00000567635	UQCRHL	A0A096LP55	91 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	IGKV1-8	A0A0C4DH67	115 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	TTLL8	A6PVC2	850 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	EFCAB8	A8MWE9	144 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	AGPS	O00116	658 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	KIF2A	O00139	706 aa	Predicted RBP	6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	TXNDC9	O14530	226 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	SLC16A5	O15375	505 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	NRP2	O60462	931 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	DPM1	O60762	260 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	SEC31A	O94979	1220 aa	Known RBP	6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	C8G	P07360	202 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	UMOD	P07911	640 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	UQCRH	P07919	91 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	EZR	P15311	586 aa	Known RBP	6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	MMP11	P24347	488 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	HRH2	P25021	359 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	CDKN2D	P55273	166 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	IL2	P60568	153 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	OCA2	Q04671	838 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	FRG1	Q14331	258 aa	Known RBP	6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	NKG7	Q16617	165 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	HIF1A	Q16665	826 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	MUM1	Q2TAK8	710 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	DCAF10	Q5QP82	559 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	RBM20	Q5T481	1227 aa	Known RBP	6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	THEMIS2	Q5TEJ8	643 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	STEAP4	Q687X5	459 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	ZNF425	Q6IV72	752 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	PAQR3	Q6TCH7	311 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	RNF44	Q7L0R7	432 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	PIWIL4	Q7Z3Z4	852 aa	Known RBP	6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	PPP1R32	Q7Z5V6	425 aa		6.6	□□□□□ -1.35
SF3B3-209	ENST00000567635	GALNT7	Q86SF2	657 aa		6.6	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms