RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 KRT38O76015 456 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 KIAA0754O94854 1291 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 GUCA1CO95843 209 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 SHBGP04278 402 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 LTA4HP09960 611 aaKnown RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 MTHFD2P13995 350 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 WT1P19544 449 aaPredicted RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 CCND1P24385 295 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 HNMTP50135 292 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 SERPINB8P50452 374 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 ITGA1P56199 1179 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 SRSF6Q13247 344 aaKnown RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 NAA25Q14CX7 972 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 PTCHD3Q3KNS1 767 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 FRMPD2BQ6IN97 320 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 TDRPQ86YL5 185 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 MCATQ8IVS2 390 aaKnown RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 ARHGEF39Q8N4T4 335 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 ABHD11Q8NFV4 315 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 OR4K1Q8NGD4 311 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 RHEBL1Q8TAI7 183 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 KCTD4Q8WVF5 259 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 SNRNP27Q8WVK2 155 aaKnown RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 HNRNPLLQ8WVV9 542 aaKnown RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 ATL1Q8WXF7 558 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 PYCR2Q96C36 320 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 OR2A5Q96R48 311 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 SARGQ9BW04 601 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 SPRTNQ9H040 489 aaPredicted RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 NMRAL1Q9HBL8 299 aa11.9□□□□□ -0.5
RNF40-211ENST00000567365 MRPS30Q9NP92 439 aaKnown RBP11.9□□□□□ -0.5
RNF40-211ENST00000567365 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.51
RNF40-211ENST00000567365 IGSF10Q6WRI0 2623 aa11.9□□□□□ -0.51
RNF40-211ENST00000567365 FITM1A5D6W6 292 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 TRIM49D1C9J1S8 452 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 RRP8O43159 456 aaKnown RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 KLK10O43240 276 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 KLK8O60259 260 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 SRPX2O60687 465 aaPredicted RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 KERAO60938 352 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 SCRG1O75711 98 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 KLHL2O95198 593 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 CCNDBP1O95273 360 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 NTRK1P04629 796 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 CAPN1P07384 714 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 ANXA5P08758 320 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 SNRPAP09012 282 aaKnown RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 TFEBP19484 476 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 TYK2P29597 1187 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 HSD17B3P37058 310 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 STAT5AP42229 794 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 CSNK1G2P78368 415 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 ABHD18Q0P651 414 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 GPS2Q13227 327 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 NAA30Q147X3 362 aaPredicted RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 CAPN13Q6MZZ7 669 aaPredicted RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 EMBQ6PCB8 327 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 SH2D5Q6ZV89 423 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 RAPH1Q70E73 1250 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 TBC1D1Q86TI0 1168 aaPredicted RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 GPSM1Q86YR5 675 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 CACNA2D3Q8IZS8 1091 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 GALNT6Q8NCL4 622 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 NLGN4YQ8NFZ3 816 aaPredicted RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 CAVIN3Q969G5 261 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 RNF31Q96EP0 1072 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 NAF1Q96HR8 494 aaKnown RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 DCBLD2Q96PD2 775 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 TMEM79Q9BSE2 394 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 PARD6BQ9BYG5 372 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 ULBP3Q9BZM4 244 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 FANCEQ9HB96 536 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 PCMTD2Q9NV79 361 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 TMEM184CQ9NVA4 438 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 ZNF358Q9NW07 568 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 SERTAD3Q9UJW9 196 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 PTBP2Q9UKA9 531 aaKnown RBP11.89□□□□□ -0.51
RNF40-211ENST00000567365 SNX7Q9UNH6 387 aa11.89□□□□□ -0.51
RNF40-211ENST00000567365 KCNE1BA0A087WTH5 132 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 LOC101059948A0A1B0GTJ6 334 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 H7BY64 318 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 MAP3K7O43318 606 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 ZNF749O43361 778 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 CPNE3O75131 537 aaKnown RBP11.88□□□□□ -0.51
RNF40-211ENST00000567365 OR2B3O76000 313 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 MED26O95402 600 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 ONECUT2O95948 504 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 NUDT17P0C025 328 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 COL6A2P12110 1019 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 EZRP15311 586 aaKnown RBP11.88□□□□□ -0.51
RNF40-211ENST00000567365 F8A1P23610 371 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 HRH2P25021 359 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 ACAP2Q15057 778 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 FAM83EQ2M2I3 478 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 PRTGQ2VWP7 1150 aa11.88□□□□□ -0.51
RNF40-211ENST00000567365 C18orf21Q32NC0 220 aaPredicted RBP11.88□□□□□ -0.51
RNF40-211ENST00000567365 TECRLQ5HYJ1 363 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms