RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 SLC26A1Q9H2B4 701 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 WDR54Q9H977 334 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 ACSS2Q9NR19 701 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 SLC22A11Q9NSA0 550 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 NDOR1Q9UHB4 597 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 TAC3Q9UHF0 121 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PDE10AQ9Y233 779 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 SNX24Q9Y343 169 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 PTRH2Q9Y3E5 179 aaKnown RBP12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 LRRK2Q5S007 2527 aa12.09□□□□□ -0.47
LPCAT4-206ENST00000566581 SETXQ7Z333 2677 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 COL12A1Q99715 3063 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 SHANK1Q9Y566 2161 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 LOC105369274A0A096LPK9 316 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 LOC102723532A0A0G2JNH3 316 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 A0A0J9YVX5 310 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 HYKKA2RU49 373 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 ARGFXA6NJG6 315 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 EIF3HO15372 352 aaKnown RBP eCLIP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 NRP2O60462 931 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 CNOT3O75175 753 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 DNAJB5O75953 348 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 TSPAN12O95859 305 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 SYF2O95926 243 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 IGHEP01854 428 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 EZRP15311 586 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 FDXRP22570 491 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 HRH2P25021 359 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 CASRP41180 1078 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 FOLR3P41439 243 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 IL2P60568 153 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 KLRB1Q12918 225 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 CALCOCO2Q13137 446 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 FASTKD3Q14CZ7 662 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 PRTGQ2VWP7 1150 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 HECTD2Q5U5R9 776 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 DUPD1Q68J44 220 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 FAM45BPQ6NSW5 357 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 CYS1Q717R9 158 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 ZNF572Q7Z3I7 529 aaPredicted RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 SLC26A11Q86WA9 606 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 PTRH1Q86Y79 214 aaKnown RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 ANKMY2Q8IV38 441 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 OR4N4Q8N0Y3 316 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 MYO1HQ8N1T3 1032 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 FBXO36Q8NEA4 188 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 FAM45AQ8TCE6 357 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 OR2A5Q96R48 311 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 PCBD2Q9H0N5 130 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 NSMCE4AQ9NXX6 385 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 ZFATQ9P243 1243 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 STOX2Q9P2F5 926 aaPredicted RBP12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 SVILO95425 2214 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 PTPN13Q12923 2485 aa12.08□□□□□ -0.48
LPCAT4-206ENST00000566581 DOPEY2Q9Y3R5 2298 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 H0YGG7 62 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 K7EM74 188 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 TXNDC9O14530 226 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 RAD51CO43502 376 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 CCND1P24385 295 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 CCL11P51671 97 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 ARF3P61204 181 aaPredicted RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 TSTA3Q13630 321 aaPredicted RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 ATP1A4Q13733 1029 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 SLC9A5Q14940 896 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 GARNL3Q5VVW2 1013 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 CPZQ66K79 652 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 SYT10Q6XYQ8 523 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 ASB18Q6ZVZ8 466 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 MRGPREQ86SM8 312 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 ZC3HC1Q86WB0 502 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 C17orf53Q8N3J3 647 aaPredicted RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 PPFIBP2Q8ND30 876 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 ANKRD7Q92527 254 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 MVB12AQ96EY5 273 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 LINGO1Q96FE5 620 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 SLC25A23Q9BV35 468 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 PHACTR1Q9C0D0 580 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 CCDC177Q9NQR7 707 aaPredicted RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 TMEM184CQ9NVA4 438 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 GRHL1Q9NZI5 618 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 SLC17A6Q9P2U8 582 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 NXT1Q9UKK6 140 aaKnown RBP12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 ADAMTS6Q9UKP5 1117 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 PSAT1Q9Y617 370 aa12.07□□□□□ -0.48
LPCAT4-206ENST00000566581 KCNE1BA0A087WTH5 132 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 VSTM2BA6NLU5 285 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 UMODP07911 640 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 HIST1H2AGP0C0S8 130 aaPredicted RBP12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 HIST1H2ADP20671 130 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 MMP11P24347 488 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 OTX2P32243 289 aa12.06□□□□□ -0.48
LPCAT4-206ENST00000566581 CSRP3P50461 194 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms