RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 APOA4P06727 396 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 CHRM3P20309 590 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 GRIA3P42263 894 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 GCGRP47871 477 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 ADARP55265 1226 aaKnown RBP18.13■□□□□ 0.49
SPSB3-207ENST00000565550 TIAL1Q01085 375 aaKnown RBP eCLIP18.13■□□□□ 0.49
SPSB3-207ENST00000565550 CUL1Q13616 776 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 SF1Q15637 639 aaKnown RBP18.13■□□□□ 0.49
SPSB3-207ENST00000565550 UNC5DQ6UXZ4 953 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 TTLL10Q6ZVT0 673 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 DCUN1D3Q8IWE4 304 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 CNTN4Q8IWV2 1026 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 CISD2Q8N5K1 135 aaKnown RBP18.13■□□□□ 0.49
SPSB3-207ENST00000565550 MNS1Q8NEH6 495 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 PRR7Q8TB68 274 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 CALML6Q8TD86 181 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 DLG3Q92796 817 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 ATP13A2Q9NQ11 1180 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 CUEDC1Q9NWM3 386 aaPredicted RBP18.13■□□□□ 0.49
SPSB3-207ENST00000565550 B3GNT3Q9Y2A9 372 aa18.13■□□□□ 0.49
SPSB3-207ENST00000565550 SPTAN1Q13813 2472 aaKnown RBP18.12■□□□□ 0.49
SPSB3-207ENST00000565550 CCDC88CQ9P219 2028 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 SLCO2B1O94956 709 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 ITGAXP20702 1163 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 BDKRB1P46663 353 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 CLCN7P51798 805 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 ARSFP54793 590 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 GPX6P59796 221 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 TMED2Q15363 201 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 CYP2A13Q16696 494 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 CCSMST1Q4G0I0 132 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 ACSBG2Q5FVE4 666 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 FCRL6Q6DN72 434 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 FIGLAQ6QHK4 219 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 IGFL3Q6UXB1 125 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 OTOAQ7RTW8 1153 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 LMNTD2Q8IXW0 634 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 IQCKQ8N0W5 287 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 OR2L8Q8NGY9 312 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 GSDMBQ8TAX9 411 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 PYROXD1Q8WU10 500 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 GPR21Q99679 349 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 AARSD1Q9BTE6 412 aaKnown RBP18.12■□□□□ 0.49
SPSB3-207ENST00000565550 ASF1BQ9NVP2 202 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 SLC39A10Q9ULF5 831 aa18.12■□□□□ 0.49
SPSB3-207ENST00000565550 A0A1B0GX78 115 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 CXorf49A8MYA2 514 aaPredicted RBP18.11■□□□□ 0.49
SPSB3-207ENST00000565550 E5RI56 91 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 AGPSO00116 658 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 NDC80O14777 642 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 RASGRF2O14827 1237 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 PFDN6O15212 129 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 KLHL41O60662 606 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 MCM3P25205 808 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 SOX8P57073 446 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 CBLBQ13191 982 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 GBX1Q14549 363 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 NR6A1Q15406 480 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 ZC3H12BQ5HYM0 836 aaKnown RBP18.11■□□□□ 0.49
SPSB3-207ENST00000565550 OVCH1Q7RTY7 1134 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 DENND1AQ8TEH3 1009 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 ZBTB20Q9HC78 741 aaPredicted RBP18.11■□□□□ 0.49
SPSB3-207ENST00000565550 INTS7Q9NVH2 962 aaKnown RBP18.11■□□□□ 0.49
SPSB3-207ENST00000565550 MOCS1Q9NZB8 636 aa18.11■□□□□ 0.49
SPSB3-207ENST00000565550 SPTBN1Q01082 2364 aaKnown RBP18.11■□□□□ 0.49
SPSB3-207ENST00000565550 PCM1Q15154 2024 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 IPO13O94829 963 aaKnown RBP18.1■□□□□ 0.49
SPSB3-207ENST00000565550 ONECUT2O95948 504 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 PIM1P11309 404 aaPredicted RBP18.1■□□□□ 0.49
SPSB3-207ENST00000565550 MMP11P24347 488 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 ECHS1P30084 290 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 CDKN2DP55273 166 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 CAV1Q03135 178 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 TTC23LQ6PF05 361 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 PALM2Q8IXS6 379 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 ZADH2Q8N4Q0 377 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 CEP112Q8N8E3 955 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 CD200R1Q8TD46 325 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 SKA2Q8WVK7 121 aaPredicted RBP18.1■□□□□ 0.49
SPSB3-207ENST00000565550 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.1■□□□□ 0.49
SPSB3-207ENST00000565550 TM9SF4Q92544 642 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 FKBP10Q96AY3 582 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 RAD51AP1Q96B01 352 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 ILKAPQ9H0C8 392 aaPredicted RBP18.1■□□□□ 0.49
SPSB3-207ENST00000565550 CUTCQ9NTM9 273 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 VPS9D1Q9Y2B5 631 aa18.1■□□□□ 0.49
SPSB3-207ENST00000565550 A1L4Q6 167 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 H3BMM5 538 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 DSCR3O14972 297 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 EIF3HO15372 352 aaKnown RBP eCLIP18.09■□□□□ 0.49
SPSB3-207ENST00000565550 PRICKLE3O43900 615 aaPredicted RBP18.09■□□□□ 0.49
SPSB3-207ENST00000565550 CBX6O95503 412 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 C1QAP02745 245 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 ALBP02768 609 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 ITGA3P26006 1051 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 MAGEA4P43358 317 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 MGAT5Q09328 741 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 AIMP2Q13155 320 aaKnown RBP18.09■□□□□ 0.49
SPSB3-207ENST00000565550 GRM7Q14831 915 aa18.09■□□□□ 0.49
SPSB3-207ENST00000565550 NKG7Q16617 165 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms