RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 GPR1P46091 355 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 GNPDA1P46926 289 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 TAS2R38P59533 333 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 UFM1P61960 85 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 MS4A2Q01362 244 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ABRAXAS2Q15018 415 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SF3A2Q15428 464 aaKnown RBP7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 AP5B1Q2VPB7 878 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 GRAMD1BQ3KR37 738 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 TMEM52BQ4KMG9 183 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 BCL7AQ4VC05 210 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ZNF648Q5T619 568 aaPredicted RBP7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 IL23RQ5VWK5 629 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 IRGCQ6NXR0 463 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 TMEM220Q6QAJ8 160 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CYP20A1Q6UW02 462 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 Q6ZSR9 355 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ZFAND4Q86XD8 727 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SYT12Q8IV01 421 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 VRK3Q8IV63 474 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 FAM9CQ8IZT9 166 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 RASGEF1AQ8N9B8 481 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CADM4Q8NFZ8 388 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CXorf40AQ8TE69 158 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 N4BP2L2Q92802 583 aaPredicted RBP7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 RAB7BQ96AH8 199 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 BIRC7Q96CA5 298 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 LRRC58Q96CX6 371 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 GPATCH1Q9BRR8 931 aaKnown RBP7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 EFHD1Q9BUP0 239 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 KLHL4Q9C0H6 718 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PCED1AQ9H1Q7 454 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 VCXQ9H320 206 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ELOVL6Q9H5J4 265 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 IL1RL2Q9HB29 575 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 LRTM1Q9HBL6 345 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PREBQ9HCU5 417 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 FZD3Q9NPG1 666 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 BATF3Q9NR55 127 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 AASDHPPTQ9NRN7 309 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 C1orf109Q9NX04 203 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ASIC5Q9NY37 505 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ABCD2Q9UBJ2 740 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 FAM8A1Q9UBU6 413 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CD300AQ9UGN4 299 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ZNF490Q9ULM2 529 aaPredicted RBP7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 RNF11Q9Y3C5 154 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 DTNAQ9Y4J8 743 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PCDHGA5Q9Y5G8 931 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 FADS3Q9Y5Q0 445 aa7.21□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CNOT1A5YKK6 2376 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CROCCQ5TZA2 2017 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 TDRD6O60522 2096 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SLC5A10A0PJK1 596 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 DCDC2BA2VCK2 349 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PRORSD1PA6NEY8 169 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ARHGEF33A8MVX0 844 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 NME4O00746 187 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 LIN7AO14910 233 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 AREL1O15033 823 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 KHNYNO15037 678 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SLC31A1O15431 190 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 AP1G1O43747 822 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PEX1O43933 1283 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 UGDHO60701 494 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 MMP20O60882 483 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SEC22BO75396 215 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PSIP1O75475 530 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 RSL1D1O76021 490 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 RECQL5O94762 991 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ZIC2O95409 532 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 NPPAP01160 153 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 IGHV4-34P06331 123 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 C7P10643 843 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 G6PDP11413 515 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 HSD17B1P14061 328 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 GNSP15586 552 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SLC6A2P23975 617 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 VARSP26640 1264 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PEX2P28328 305 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 HALP42357 657 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CASP2P42575 452 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 BDKRB1P46663 353 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PREPP48147 710 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CCR5P51681 352 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 CTSCP53634 463 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ATXN3P54252 364 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 EEFSECP57772 596 aaKnown RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PLOD1Q02809 727 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 ZNF33BQ06732 778 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 TMEM115Q12893 351 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 INPP5AQ14642 412 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 DUOXA1Q1HG43 343 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 PTCHD3Q3KNS1 767 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 AASDHQ4L235 1098 aaPredicted RBP7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 TRIM61Q5EBN2 209 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 SGO1Q5FBB7 561 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 C6orf10Q5SRN2 563 aa7.2□□□□□ -1.26
MAP1LC3B-205ENST00000564638 OGFRL1Q5TC84 451 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms