RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 CD72P21854 359 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ITPKAP23677 461 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ADH6P28332 368 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ACSL1P33121 698 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TPMTP51580 245 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 KIAA1024LP59773 190 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ACTR3P61158 418 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 UFM1P61960 85 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TAP2Q03519 686 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 NAE1Q13564 534 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 GTF2H3Q13889 308 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 CEACAM7Q14002 265 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 RCAN2Q14206 197 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF423Q2M1K9 1284 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TTC31Q49AM3 519 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 RFTN2Q52LD8 501 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PYCR3Q53H96 274 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PIGGQ5H8A4 983 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 COQ5Q5HYK3 327 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 EOGTQ5NDL2 527 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TPRG1LQ5T0D9 272 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 REP15Q6BDI9 236 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 DOK6Q6PKX4 331 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 C16orf54Q6UWD8 224 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 Q6ZS52 159 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 KBTBD6Q86V97 674 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 AMZ2Q86W34 360 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ZFAND4Q86XD8 727 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 MYLK4Q86YV6 388 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 DEFB107AQ8IZN7 70 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PGAM4Q8N0Y7 254 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 MIER2Q8N344 545 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 DENND6BQ8NEG7 585 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 FLCNQ8NFG4 579 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 OR9A1PQ8NGU1 263 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 CFAP61Q8NHU2 1237 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 WDR20Q8TBZ3 569 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PROKR1Q8TCW9 393 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 SKA2Q8WVK7 121 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ATL1Q8WXF7 558 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 C11orf24Q96F05 449 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HIST1H2AHQ96KK5 128 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 BMFQ96LC9 184 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HHIPQ96QV1 700 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HBEGFQ99075 208 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 HIST1H2AJQ99878 128 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TIMM29Q9BSF4 260 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 H2AFJQ9BTM1 129 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 APOOQ9BUR5 198 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 SLC25A23Q9BV35 468 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ACPTQ9BZG2 426 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TWSG1Q9GZX9 223 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 RMI1Q9H9A7 625 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 EFCAB1Q9HAE3 211 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 EBF2Q9HAK2 575 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ITM2CQ9NQX7 267 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PHPT1Q9NRX4 125 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 C2orf42Q9NWW7 574 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 FAM8A1Q9UBU6 413 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 NKX1-2Q9UD57 310 aaPredicted RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PRPF19Q9UMS4 504 aaKnown RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 NDRG2Q9UN36 371 aaKnown RBP6.32□□□□□ -1.4
CAPN3-210ENST00000561817 DUSP12Q9UNI6 340 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 SH2B3Q9UQQ2 575 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PLEKHM1Q9Y4G2 1056 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 ANGPTL3Q9Y5C1 460 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PCDHGA7Q9Y5G6 932 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 PCDHGA11Q9Y5H2 935 aa6.32□□□□□ -1.4
CAPN3-210ENST00000561817 TCRBV21S2A2A0A5A6 115 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 FAM234BA2RU67 622 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 DCDC2BA2VCK2 349 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 KLHL33A6NCF5 533 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 POM121BA6NF01 834 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 BBIP1A8MTZ0 92 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 C9JVG2 144 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 E7EQ34 232 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 H0YIV9 168 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GIPC1O14908 333 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ULK1O75385 1050 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 RSL1D1O76021 490 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 G6PDP11413 515 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ACPPP15309 386 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NPPBP16860 134 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 TYRP1P17643 537 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 GNAZP19086 355 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 JAK1P23458 1154 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 MAP4P27816 1152 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 HMOX2P30519 316 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NUDT2P50583 147 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 THOP1P52888 689 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 NME5P56597 212 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 YBX1P67809 324 aaKnown RBP6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ZXDAP98168 799 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 HMGCS1Q01581 520 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 TNP2Q05952 138 aa6.31□□□□□ -1.4
CAPN3-210ENST00000561817 ZNF33BQ06732 778 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms