RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 UBOX5O94941 541 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 FKBP9O95302 570 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 PDYNP01213 254 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 SP9P0CG40 484 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CDH1P12830 882 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 IDO1P14902 403 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 GRK3P35626 688 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CTSKP43235 329 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 RXRGP48443 463 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 HHEXQ03014 270 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CSTF3Q12996 717 aaKnown RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 SRSF5Q13243 272 aaKnown RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 SIM2Q14190 667 aaPredicted RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 E2F2Q14209 437 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 KRT72Q14CN4 511 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 NAA25Q14CX7 972 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 ABRAXAS2Q15018 415 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 NR6A1Q15406 480 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 GSTA3Q16772 222 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 LACTB2Q53H82 288 aaPredicted RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 XKR7Q5GH72 579 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 ICE2Q659A1 982 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 OGFOD2Q6N063 350 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 ARMC6Q6NXE6 501 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 KLHL35Q6PF15 583 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 SCIMPQ6UWF3 145 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CHSY3Q70JA7 882 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 FAM9CQ8IZT9 166 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 NAGSQ8N159 534 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CPSF7Q8N684 471 aaKnown RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 ZNF548Q8NEK5 533 aaPredicted RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 ABHD11Q8NFV4 315 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 OR2A1Q8NGT9 310 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 USP7Q93009 1102 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CMTM5Q96DZ9 223 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 XKR8Q9H6D3 395 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 BRF2Q9HAW0 419 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 TMEM184CQ9NVA4 438 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 G3BP2Q9UN86 482 aaKnown RBP9.94□□□□□ -0.82
USP3-219ENST00000561326 SNX7Q9UNH6 387 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 PCDHGA2Q9Y5H1 932 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 ENTPD2Q9Y5L3 495 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 CAPN7Q9Y6W3 813 aa9.94□□□□□ -0.82
USP3-219ENST00000561326 TTC28Q96AY4 2481 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 KCNE1BA0A087WTH5 132 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ANKDD1BA6NHY2 528 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 B4DGG1 531 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 FOXE1O00358 373 aaPredicted RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 YKT6O15498 198 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 SEC22BO75396 215 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 CELA2BP08218 269 aaPredicted RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 CHRM5P08912 532 aaPredicted RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 THRAP10827 490 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ESRRAP11474 423 aaPredicted RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 PCNAP12004 261 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 SERPINB1P30740 379 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 PIK3CBP42338 1070 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ATP4BP51164 291 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 NUBP1P53384 320 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ERVK-8P63133 956 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 UBE2IP63279 158 aaKnown RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 EMX2Q04743 252 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 BNIP1Q12981 228 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 GRIK2Q13002 908 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 KLF10Q13118 480 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 GPR18Q14330 331 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 SQLEQ14534 574 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ANGPT1Q15389 498 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 KIF19Q2TAC6 998 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 AP5B1Q2VPB7 878 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 GALNTL6Q49A17 601 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 C6orf136Q5SQH8 315 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 CATSPEREQ5SY80 951 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 OGFOD3Q6PK18 319 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 TMIGD1Q6UXZ0 262 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 Q6ZSR9 355 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 TMEM26Q6ZUK4 368 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 LAS2Q8IYD9 372 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 LMNTD1Q8N9Z9 388 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 LINC01555Q8NAE3 123 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ZBTB44Q8NCP5 570 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 TTLQ8NG68 377 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 OR7G3Q8NG95 312 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 OR4K1Q8NGD4 311 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 SLC37A2Q8TED4 501 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 CMTM7Q96FZ5 175 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 METTL2AQ96IZ6 378 aaKnown RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 CATSPER2Q96P56 530 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ELF4Q99607 663 aaPredicted RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 CCDC106Q9BWC9 280 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 NT5DC2Q9H857 520 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 UCK1Q9HA47 277 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 MRPS30Q9NP92 439 aaKnown RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 GEMIN8Q9NWZ8 242 aaKnown RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 C1orf109Q9NX04 203 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 ARMCX1Q9P291 453 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 VPS29Q9UBQ0 182 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 EIF3LQ9Y262 564 aaKnown RBP9.93□□□□□ -0.82
USP3-219ENST00000561326 TSC22D4Q9Y3Q8 395 aa9.93□□□□□ -0.82
USP3-219ENST00000561326 SNX11Q9Y5W9 270 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms