RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 DNAJC21Q5F1R6 531 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 LRRC38Q5VT99 294 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 DENND5AQ6IQ26 1287 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TUBA3EQ6PEY2 450 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TMTC1Q8IUR5 882 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 GHDCQ8N2G8 530 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 MARVELD2Q8N4S9 558 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 OR2L8Q8NGY9 312 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 CTNNBL1Q8WYA6 563 aaPredicted RBP12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 QKIQ96PU8 341 aaKnown RBP eCLIP12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 TUBB6Q9BUF5 446 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 YIPF2Q9BWQ6 316 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 C10orf88Q9H8K7 445 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 REXO2Q9Y3B8 237 aaKnown RBP12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 FAM169AQ9Y6X4 670 aa12.14□□□□□ -0.47
RABGGTA-213ENST00000560127 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 RCCD1A6NED2 376 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 PRRG2O14669 202 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 TOXO94900 526 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 EIF2S1P05198 315 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 TMEM253P0C7T8 217 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 FOSL1P15407 271 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 MSX1P28360 303 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 EEF1DP29692 281 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 CD96P40200 585 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 CSE1LP55060 971 aaKnown RBP12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 PLOD1Q02809 727 aaPredicted RBP12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 FOLH1Q04609 750 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 OR1C1Q15619 314 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 PRTGQ2VWP7 1150 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 RNFT1Q5M7Z0 435 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 ACER2Q5QJU3 275 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 CES4AQ5XG92 561 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 KAZNQ674X7 775 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 RNF44Q7L0R7 432 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 VRK3Q8IV63 474 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 AMER3Q8N944 861 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 P3H4Q92791 437 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 NINJ1Q92982 152 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 HAUS1Q96CS2 278 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 NPAS2Q99743 824 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 UCK2Q9BZX2 261 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 TGIF2Q9GZN2 237 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 C14orf105Q9NVL8 296 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 ANKRD10Q9NXR5 420 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 IMPACTQ9P2X3 320 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 KCNN3Q9UGI6 736 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 KLK4Q9Y5K2 254 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 ARID1AO14497 2285 aa12.13□□□□□ -0.47
RABGGTA-213ENST00000560127 FBN1P35555 2871 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 IGHV3-20A0A0C4DH32 117 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 SOWAHDA6NJG2 315 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 QSOX1O00391 747 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 RASGRF2O14827 1237 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 AKR1B10O60218 316 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 FKBP9O95302 570 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 TNNT1P13805 278 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 PSMB4P28070 264 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 PSMB5P28074 263 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 CDC25BP30305 580 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 SLC26A3P40879 764 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 LTBQ06643 244 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 ITIH4Q14624 930 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 ODF2Q5BJF6 829 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 SPINK14Q6IE38 97 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 H3F3CQ6NXT2 135 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 PACS1Q6VY07 963 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 RAD9BQ6WBX8 426 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 CEP128Q6ZU80 1094 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 GALNTL5Q7Z4T8 443 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 DCUN1D3Q8IWE4 304 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 SLC22A15Q8IZD6 547 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 EID3Q8N140 333 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 LILRB4Q8NHJ6 448 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 CFAP61Q8NHU2 1237 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 SLC35G2Q8TBE7 412 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 CDKN2AIPNLQ96HQ2 116 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 CABS1Q96KC9 395 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 ZNF354BQ96LW1 612 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 PANX2Q96RD6 677 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 MIPEPQ99797 713 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 LIME1Q9H400 295 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 SYNPO2LQ9H987 977 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 NLE1Q9NVX2 485 aaPredicted RBP12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 DDX56Q9NY93 547 aaKnown RBP12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 CDC14AQ9UNH5 594 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 HYOU1Q9Y4L1 999 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 HRH3Q9Y5N1 445 aa12.12□□□□□ -0.47
RABGGTA-213ENST00000560127 A0A0U1RQJ8 604 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 HACD1B0YJ81 288 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 H0YGG7 62 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 MAN1A2O60476 641 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 SEC24DO94855 1032 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 HOXD4P09016 255 aaPredicted RBP12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 TPM1P09493 284 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 C8orf89P0DMQ9 161 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 CD46P15529 392 aa12.11□□□□□ -0.47
RABGGTA-213ENST00000560127 RBL1P28749 1068 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms